ggKbase home page

NECEvent2014_2_3_scaffold_270

Alias: 172_003_scaffold_270

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_270_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

233..1450
DNA (1218bp) protein (406aa)
Threonine dehydratase II {ECO:0000313|EMBL:CCL30752.1}; EC=4.3.1.19 {ECO:0000313|EMBL:CCL30752.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Pepto
Threonine ammonia-lyase n=197 Tax=Clostridium difficile RepID=C9XMN9_CLODC rbh
tdcB; threonine dehydratase catabolic
NECEvent2014_2_3_scaffold_270_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1545..1925
DNA (381bp) protein (127aa)
Translation initiation inhibitor n=222 Tax=Clostridium difficile RepID=T2TEN0_CLODI
translation inhibitor endoribonuclease
Putative translation inhibitor endoribonuclease {ECO:0000313|EMBL:CCK98935.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source
NECEvent2014_2_3_scaffold_270_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2209..2691
DNA (483bp) protein (161aa)
Glucose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EQE60980.1}; EC=2.7.1.- {ECO:0000313|EMBL:EQE60980.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiale
Glucose-specific phosphotransferase enzyme IIA component n=143 Tax=Clostridium difficile RepID=T3GI48_CLODC rbh
PTS system transporter subunit IIA
NECEvent2014_2_3_scaffold_270_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2712..3527
DNA (816bp) protein (272aa)
PRD domain protein n=192 Tax=Clostridium difficile RepID=C9XMN6_CLODC rbh
transcriptional antiterminator
PRD domain protein {ECO:0000313|EMBL:EHJ25336.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 0
NECEvent2014_2_3_scaffold_270_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3580..5130
DNA (1551bp) protein (517aa)
PTS system, glucose-like IIB component domain protein {ECO:0000313|EMBL:EQE61014.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQE61014.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
PTS system, glucose-like IIB component domain protein n=79 Tax=Clostridium difficile RepID=T3GEN3_CLODC rbh
PTS system transporter subunit IIBC
NECEvent2014_2_3_scaffold_270_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5227..6579
DNA (1353bp) protein (451aa)
6-phospho-alpha-glucosidase {ECO:0000313|EMBL:EQE60993.1}; EC=3.2.1.122 {ECO:0000313|EMBL:EQE60993.1};; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; P
glycoside hydrolase (EC:3.2.1.-)
6-phospho-alpha-glucosidase n=32 Tax=Clostridium difficile RepID=T3GGB9_CLODC rbh
NECEvent2014_2_3_scaffold_270_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6680..7468
DNA (789bp) protein (263aa)
Transcriptional regulator, AraC family n=60 Tax=Clostridium difficile RepID=G6BZQ4_CLODI rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:CDT33496.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclost
AraC family transcriptional regulator
NECEvent2014_2_3_scaffold_270_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7515..8234
DNA (720bp) protein (240aa)
Transglutaminase-like superfamily protein n=25 Tax=Clostridium difficile RepID=T3GI43_CLODC rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22845.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
NECEvent2014_2_3_scaffold_270_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8358..9758)
DNA (1401bp) protein (467aa)
H+ antiporter-2 family protein n=149 Tax=Clostridium difficile RepID=T3GDR8_CLODC rbh
transporter
Transporter, Major Facilitator Superfamily (MFS) {ECO:0000313|EMBL:CCL22844.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sourc
NECEvent2014_2_3_scaffold_270_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9762..10652)
DNA (891bp) protein (297aa)
Bacterial regulatory s, tetR family protein n=91 Tax=Clostridium difficile RepID=T3GEM9_CLODC rbh
Bacterial regulatory s, tetR family protein {ECO:0000313|EMBL:EQG75501.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pe
TetR family transcriptional regulator
NECEvent2014_2_3_scaffold_270_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10931..11578
DNA (648bp) protein (216aa)
Putative D-alanyl-D-alanine carboxypeptidase {ECO:0000313|EMBL:CAJ69390.1}; EC=3.4.16.4 {ECO:0000313|EMBL:CAJ69390.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostre
D-alanyl-D-alanine carboxypeptidase family protein n=182 Tax=Clostridium difficile RepID=C9XMM9_CLODC rbh
putative D-alanyl-D-alanine carboxypeptidase
NECEvent2014_2_3_scaffold_270_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11902..14541
DNA (2640bp) protein (880aa)
Putative cation-transporting P-type ATPase {ECO:0000313|EMBL:CCL30741.1}; EC=3.6.3.8 {ECO:0000313|EMBL:CCL30741.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
Cation-transporting ATPase n=125 Tax=Clostridium difficile RepID=C9XMM8_CLODC rbh
cation-transporting ATPase
NECEvent2014_2_3_scaffold_270_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14599..15702)
DNA (1104bp) protein (368aa)
Aminotransferase class-V family protein n=116 Tax=Clostridium difficile RepID=T3GI38_CLODC rbh
Putative pyridoxal phosphate-dependent transferase {ECO:0000313|EMBL:CCL22840.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
putative pyridoxal phosphate-dependenttransferase
NECEvent2014_2_3_scaffold_270_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16063..16884
DNA (822bp) protein (274aa)
Putative hydrolase, HAD superfamily, IIB subfamily {ECO:0000313|EMBL:CCL30739.1}; EC=3.1.3.- {ECO:0000313|EMBL:CCL30739.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
Cof-like hydrolase family protein n=185 Tax=Clostridium difficile RepID=T3GDT2_CLODC rbh
hydrolase
NECEvent2014_2_3_scaffold_270_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17261..18577
DNA (1317bp) protein (439aa)
argininosuccinate lyase (EC:4.3.2.1)
Argininosuccinate lyase {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:SAAS00211019}; Short=ASAL {ECO:0000256|HAMAP-Rule:MF_00006};; EC=4.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00006, ECO:0000256|SAAS:S
Argininosuccinate lyase n=101 Tax=Clostridium difficile RepID=ARLY_CLOD6 rbh
Displaying 15 items

View Taxonomy