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NECEvent2014_2_3_scaffold_50

Alias: 172_003_scaffold_50

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Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_50_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1146
DNA (1146bp) protein (382aa)
Putative integral membrane protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S1G6_FINM2 rbh
putative integral membrane protein
Putative integral membrane protein {ECO:0000313|EMBL:BAG08206.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strai
NECEvent2014_2_3_scaffold_50_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1112..2110
DNA (999bp) protein (333aa)
DNA polymerase III, delta subunit {ECO:0000313|EMBL:EFL54848.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EFL54848.1};; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Fin
DNA polymerase III, delta subunit n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVV0_FINMA rbh
putative DNA polymerase III subunit delta
NECEvent2014_2_3_scaffold_50_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2164..2427)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=4 Tax=Finegoldia magna RepID=RS20_FINM2
30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-C
NECEvent2014_2_3_scaffold_50_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2550..3074
DNA (525bp) protein (175aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.
Signal peptidase I n=2 Tax=Finegoldia magna RepID=D9PS02_FINMA rbh
signal peptidase I
NECEvent2014_2_3_scaffold_50_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3084..4895
DNA (1812bp) protein (604aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
Elongation factor 4 n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PS03_FINMA rbh
GTP-binding protein LepA
NECEvent2014_2_3_scaffold_50_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4943..6046
DNA (1104bp) protein (368aa)
Oxygen-independent coproporphyrinogen III oxidase n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S1G1_FINM2 rbh
oxygen-independent coproporphyrinogen III oxidase
Oxygen-independent coproporphyrinogen III oxidase {ECO:0000313|EMBL:BAG08201.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegold
NECEvent2014_2_3_scaffold_50_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6070..7176
DNA (1107bp) protein (369aa)
Heat-inducible transcription repressor hrcA n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N2D5_FINMA rbh
Heat-inducible transcription repressor HrcA {ECO:0000256|HAMAP-Rule:MF_00081, ECO:0000256|SAAS:SAAS00101987}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; F
heat-inducible transcription repressor
NECEvent2014_2_3_scaffold_50_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7166..7726
DNA (561bp) protein (187aa)
Protein GrpE n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVU4_FINMA rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151, ECO:0000256|RuleBase:RU000639}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
heat shock protein
NECEvent2014_2_3_scaffold_50_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7768..9594
DNA (1827bp) protein (609aa)
Chaperone protein DnaK n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVU3_FINMA rbh
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP
heat shock protein
NECEvent2014_2_3_scaffold_50_10
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9693..10811
DNA (1119bp) protein (373aa)
Chaperone protein DnaJ n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9N2D8_FINMA rbh
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="
heat shock protein
NECEvent2014_2_3_scaffold_50_11
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10811..11734
DNA (924bp) protein (308aa)
Ribosomal protein L11 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00735, ECO:0000256|SAAS:SAAS00189466}; Short=L11 Mtase {ECO:0000256|HAMAP-Rule:MF_00735};; EC=2.1.1.- {ECO:0000256|HAMAP-Rule:MF_0073
Ribosomal protein L11 methyltransferase n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PS09_FINMA rbh
ribosomal protein L11 methyltransferase
NECEvent2014_2_3_scaffold_50_12
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11727..12452
DNA (726bp) protein (242aa)
Ribosomal RNA small subunit methyltransferase E {ECO:0000256|PIRNR:PIRNR015601}; EC=2.1.1.193 {ECO:0000256|PIRNR:PIRNR015601};; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; P
Ribosomal RNA small subunit methyltransferase E n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S1F5_FINM2 rbh
hypothetical protein
NECEvent2014_2_3_scaffold_50_13
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12452..13744
DNA (1293bp) protein (431aa)
tRNA methylthiotransferase YqeV n=2 Tax=Finegoldia magna RepID=E1KVT9_FINMA rbh
tRNA methylthiotransferase YqeV {ECO:0000313|EMBL:EFL54891.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.
Fe-S oxidoreductase
NECEvent2014_2_3_scaffold_50_14
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13791..14126
DNA (336bp) protein (112aa)
HIT family hydrolase n=4 Tax=Finegoldia magna RepID=B0S1F3_FINM2
HIT family hydrolase
HIT family hydrolase {ECO:0000313|EMBL:EXF26886.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
NECEvent2014_2_3_scaffold_50_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14221..14400
DNA (180bp) protein (60aa)
30S ribosomal protein S21 n=5 Tax=Finegoldia magna RepID=RS21_FINM2
30S ribosomal protein S21
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" sourc
NECEvent2014_2_3_scaffold_50_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14506..15123
DNA (618bp) protein (206aa)
Nodulation efficiency protein D n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PS14_FINMA rbh
Nodulation efficiency protein D {ECO:0000313|EMBL:EXF26888.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_2_3_scaffold_50_17
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15125..16108
DNA (984bp) protein (328aa)
UPF0365 protein FMG_0772 n=5 Tax=Finegoldia magna RepID=Y772_FINM2 rbh
hypothetical protein
UPF0365 protein HMPREF9289_1277 {ECO:0000256|HAMAP-Rule:MF_01562}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS03
NECEvent2014_2_3_scaffold_50_18
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16108..16521
DNA (414bp) protein (138aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PS16_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EXF26890.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_2_3_scaffold_50_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16628..17095
DNA (468bp) protein (156aa)
Ribosome maturation factor RimP n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PS17_FINMA rbh
Ribosome maturation factor RimP {ECO:0000256|HAMAP-Rule:MF_01077, ECO:0000256|SAAS:SAAS00001667}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;"
hypothetical protein
NECEvent2014_2_3_scaffold_50_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17102..18370
DNA (1269bp) protein (423aa)
Transcription terminator n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S1E7_FINM2 rbh
transcription terminator
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source=
NECEvent2014_2_3_scaffold_50_21
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18397..18660
DNA (264bp) protein (88aa)
Uncharacterized protein n=4 Tax=Finegoldia magna RepID=B0S1E6_FINM2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGS33127.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
NECEvent2014_2_3_scaffold_50_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18679..20970
DNA (2292bp) protein (764aa)
Translation initiation factor IF-2 n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=IF2_FINM2 rbh
Translation initiation factor IF-2 {ECO:0000255|HAMAP-Rule:MF_00100}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (s
translation initiation factor IF-2
NECEvent2014_2_3_scaffold_50_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20978..21343
DNA (366bp) protein (122aa)
Ribosome-binding factor A n=3 Tax=Finegoldia magna RepID=RBFA_FINM2
ribosome-binding factor A
Ribosome-binding factor A {ECO:0000255|HAMAP-Rule:MF_00003}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATC
NECEvent2014_2_3_scaffold_50_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21333..22301
DNA (969bp) protein (323aa)
DHHA1 domain protein n=1 Tax=Finegoldia magna ACS-171-V-Col3 RepID=D9PS21_FINMA rbh
DHHA1 domain protein {ECO:0000313|EMBL:EFK93490.1}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ACS-171-V-Col3.;"
exopolyphosphatase family protein
NECEvent2014_2_3_scaffold_50_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22285..23148
DNA (864bp) protein (288aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylat
tRNA pseudouridine synthase B n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVS7_FINMA rbh
tRNA pseudouridine 5S synthase
NECEvent2014_2_3_scaffold_50_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23139..24116
DNA (978bp) protein (326aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=334413 species="Bacteria; Firmicutes;
Riboflavin biosynthesis protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S1E1_FINM2 rbh
riboflavin biosynthesis protein
NECEvent2014_2_3_scaffold_50_27
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24147..24413
DNA (267bp) protein (89aa)
30S ribosomal protein S15 n=5 Tax=Finegoldia magna RepID=RS15_FINM2
30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343, ECO:0000256|RuleBase:RU003920}; TaxID=768713 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" sourc
NECEvent2014_2_3_scaffold_50_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24460..26604
DNA (2145bp) protein (715aa)
Polyribonucleotide nucleotidyltransferase {ECO:0000256|HAMAP-Rule:MF_01595}; EC=2.7.7.8 {ECO:0000256|HAMAP-Rule:MF_01595};; Polynucleotide phosphorylase {ECO:0000256|HAMAP-Rule:MF_01595}; TaxID=866773
Polyribonucleotide nucleotidyltransferase n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVS4_FINMA rbh
polyribonucleotide nucleotidyltransferase
NECEvent2014_2_3_scaffold_50_29
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26656..27087
DNA (432bp) protein (144aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVS3_FINMA
deoxyuridine 5'-triphosphate nucleotidohydrolase
NECEvent2014_2_3_scaffold_50_30
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27090..29312
DNA (2223bp) protein (741aa)
FtsK/SpoIIIE family protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KVS2_FINMA rbh
FtsK/SpoIIIE family protein {ECO:0000313|EMBL:EFL54960.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
stage III sporulation protein E
Displaying items 1-30 of 67 in total

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