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NECEvent2014_2_3_scaffold_183

Alias: 172_003_scaffold_183

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Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_183_1
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(154..609)
DNA (456bp) protein (152aa)
Iron-sulfur cofactor synthesis protein NifU homolog n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S0D2_FINM2 rbh
iron-sulfur cofactor synthesis protein NifU-like protein
Nitrogen fixation protein NifU {ECO:0000313|EMBL:EXF27639.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
NECEvent2014_2_3_scaffold_183_2
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(596..1846)
DNA (1251bp) protein (417aa)
Cysteine desulfurase {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216}; EC=2.8.1.7 {ECO:0000256|RuleBase:RU004506, ECO:0000256|SAAS:SAAS00062216};; TaxID=866779 species="Bacteria; Firmicu
Cysteine desulfurase n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZ95_FINMA rbh
selenocysteine lyase
NECEvent2014_2_3_scaffold_183_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1836..2885)
DNA (1050bp) protein (350aa)
SufB/sufD domain protein n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KYV2_FINMA rbh
SufB/sufD domain protein {ECO:0000313|EMBL:EFL53759.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;"
putative iron-regulated ABC transporter
NECEvent2014_2_3_scaffold_183_4
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2895..4307)
DNA (1413bp) protein (471aa)
FeS assembly protein SufB n=3 Tax=Finegoldia magna RepID=D9PSV6_FINMA rbh
putative iron-regulated ABC transporter ATP-binding protein
FeS assembly protein SufB {ECO:0000313|EMBL:EGS34363.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC00105
NECEvent2014_2_3_scaffold_183_5
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4307..5056)
DNA (750bp) protein (250aa)
FeS assembly ATPase SufC n=4 Tax=Finegoldia magna RepID=D9PSV7_FINMA rbh
putative iron-regulated ABC transporter ATP-binding protein
FeS assembly ATPase SufC {ECO:0000313|EMBL:EGS34545.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050
NECEvent2014_2_3_scaffold_183_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5172..5447)
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Finegoldia magna RepID=B0S0G8_FINM2
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EGS34336.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
NECEvent2014_2_3_scaffold_183_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5645..6847)
DNA (1203bp) protein (401aa)
Trypsin n=3 Tax=Finegoldia magna RepID=D9PSV9_FINMA rbh
Trypsin {ECO:0000313|EMBL:EGS34384.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
trypsin-like serine protease Do
NECEvent2014_2_3_scaffold_183_8
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7017..8426)
DNA (1410bp) protein (470aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Fine
Dihydrolipoyl dehydrogenase n=3 Tax=Finegoldia magna RepID=D9PSW0_FINMA rbh
dihydrolipoamide dehydrogenase
NECEvent2014_2_3_scaffold_183_9
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8426..9880)
DNA (1455bp) protein (485aa)
Probable glycine dehydrogenase (decarboxylating) subunit 2 {ECO:0000256|HAMAP-Rule:MF_00713}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00713};; Glycine cleavage system P-protein subunit 2 {ECO:0000256|HA
Probable glycine dehydrogenase (decarboxylating) subunit 2 n=4 Tax=Finegoldia magna RepID=B0S0G5_FINM2 rbh
glycine dehydrogenase subunit 2
NECEvent2014_2_3_scaffold_183_10
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9882..11228)
DNA (1347bp) protein (449aa)
Probable glycine dehydrogenase (decarboxylating) subunit 1 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00015358}; EC=1.4.4.2 {ECO:0000256|HAMAP-Rule:MF_00712, ECO:0000256|SAAS:SAAS00022796}
Probable glycine dehydrogenase [decarboxylating] subunit 1 n=1 Tax=Finegoldia magna BVS033A4 RepID=E1KYV9_FINMA rbh
glycine dehydrogenase subunit
NECEvent2014_2_3_scaffold_183_11
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11228..11608)
DNA (381bp) protein (127aa)
Glycine cleavage system H protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S0G3_FINM2
glycine cleavage system H protein
Glycine cleavage system H protein {ECO:0000256|HAMAP-Rule:MF_00272}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (st
NECEvent2014_2_3_scaffold_183_12
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11621..12715)
DNA (1095bp) protein (365aa)
Aminomethyltransferase {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981}; EC=2.1.2.10 {ECO:0000256|HAMAP-Rule:MF_00259, ECO:0000256|RuleBase:RU003981};; Glycine cleavage system T protei
Aminomethyltransferase n=2 Tax=Finegoldia magna RepID=F9MZA5_FINMA rbh
glycine cleavage system T protein
NECEvent2014_2_3_scaffold_183_13
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12876..14534)
DNA (1659bp) protein (553aa)
Formate--tetrahydrofolate ligase {ECO:0000256|HAMAP-Rule:MF_01543}; EC=6.3.4.3 {ECO:0000256|HAMAP-Rule:MF_01543};; Formyltetrahydrofolate synthetase {ECO:0000256|HAMAP-Rule:MF_01543}; TaxID=768713 spe
Formate--tetrahydrofolate ligase n=4 Tax=Finegoldia magna RepID=FTHS_FINM2 rbh
formate-tetrahydrofolate ligase rbh
NECEvent2014_2_3_scaffold_183_14
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14727..15920)
DNA (1194bp) protein (398aa)
Metallo-beta-lactamase domain protein n=3 Tax=Finegoldia magna RepID=D9PSW6_FINMA rbh
Flavodoxin {ECO:0000313|EMBL:EXF27538.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
flavoprotein
NECEvent2014_2_3_scaffold_183_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15943..16770)
DNA (828bp) protein (276aa)
ATPases of the PP superfamily n=4 Tax=Finegoldia magna RepID=B0S0F9_FINM2 rbh
PP family ATPase
Potassium-transporting ATPase subunit A {ECO:0000313|EMBL:EXF27537.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna
NECEvent2014_2_3_scaffold_183_16
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16721..17578)
DNA (858bp) protein (286aa)
Metallo-beta-lactamase domain protein n=3 Tax=Finegoldia magna RepID=D9PSW8_FINMA rbh
Metallo-beta-lactamase domain protein {ECO:0000313|EMBL:EGS34331.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY4
metallo-beta-lactamase superfamily hydrolase
NECEvent2014_2_3_scaffold_183_17
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17679..18905)
DNA (1227bp) protein (409aa)
O-antigen polymerase n=2 Tax=Finegoldia magna RepID=E1KYW6_FINMA rbh
O-antigen ligase {ECO:0000313|EMBL:EGS34385.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
hypothetical protein
NECEvent2014_2_3_scaffold_183_18
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19088..20077)
DNA (990bp) protein (330aa)
Ornithine carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01109, ECO:0000256|SAAS:SAAS00106174}; Short=OTCase {ECO:0000256|HAMAP-Rule:MF_01109};; EC=2.1.3.3 {ECO:0000256|HAMAP-Rule:MF_01109, ECO:00002
Ornithine carbamoyltransferase n=4 Tax=Finegoldia magna RepID=B0S0F6_FINM2 rbh
ornithine carbamoyltransferase
NECEvent2014_2_3_scaffold_183_19
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20081..21262)
DNA (1182bp) protein (394aa)
Arginine deiminase {ECO:0000256|SAAS:SAAS00092997}; EC=3.5.3.6 {ECO:0000256|SAAS:SAAS00092997};; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;"
Arginine deiminase n=3 Tax=Finegoldia magna RepID=F9MZB2_FINMA rbh
arginine deiminase
NECEvent2014_2_3_scaffold_183_20
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21402..21905
DNA (504bp) protein (168aa)
Acetyltransferase, GNAT family n=3 Tax=Finegoldia magna RepID=D9PSX2_FINMA rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFL53766.1}; TaxID=866773 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna BVS033A4.;
acetyltransferase
NECEvent2014_2_3_scaffold_183_21
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21979..22452)
DNA (474bp) protein (158aa)
Putative lipoprotein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZB4_FINMA rbh
Uncharacterized protein {ECO:0000313|EMBL:EXF27531.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_2_3_scaffold_183_22
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22575..23564)
DNA (990bp) protein (330aa)
GtrA-like protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZB5_FINMA rbh
GtrA-like protein {ECO:0000313|EMBL:EGS34420.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409CC001050417.;"
putative glycosyltransferase
NECEvent2014_2_3_scaffold_183_23
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23582..23809)
DNA (228bp) protein (76aa)
Uncharacterized protein n=4 Tax=Finegoldia magna RepID=B0S0F1_FINM2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG07869.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 2932
NECEvent2014_2_3_scaffold_183_24
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23799..24638)
DNA (840bp) protein (280aa)
Mechanosensitive ion channel family protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S0F0_FINM2 rbh
mechanosensitive ion channel family protein
Mechanosensitive ion channel family protein {ECO:0000313|EMBL:BAG07868.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia mag
NECEvent2014_2_3_scaffold_183_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24642..24896)
DNA (255bp) protein (85aa)
Uncharacterized protein n=3 Tax=Finegoldia magna RepID=D6S854_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EXF27527.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
hypothetical protein
NECEvent2014_2_3_scaffold_183_26
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24896..25477)
DNA (582bp) protein (194aa)
Selenium metabolism protein YedF n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZB9_FINMA rbh
Selenium metabolism protein YedF {ECO:0000313|EMBL:EGS34413.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
hypothetical protein
NECEvent2014_2_3_scaffold_183_27
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25480..26442)
DNA (963bp) protein (321aa)
Uncharacterized protein n=1 Tax=Finegoldia magna (strain ATCC 29328) RepID=B0S0E7_FINM2 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG07865.1}; TaxID=334413 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna (strain ATCC 2932
NECEvent2014_2_3_scaffold_183_28
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26435..27943)
DNA (1509bp) protein (503aa)
Chloride transporter, ClC family n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZC1_FINMA rbh
Chloride channel protein {ECO:0000313|EMBL:EXF27524.1}; TaxID=1459804 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ALB8.;"
chloride channel protein
NECEvent2014_2_3_scaffold_183_29
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27973..28647)
DNA (675bp) protein (225aa)
Putative uncharacterized protein n=1 Tax=Finegoldia magna SY403409CC001050417 RepID=F9MZC2_FINMA rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EGS34251.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY403409
hypothetical protein
NECEvent2014_2_3_scaffold_183_30
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28771..28977
DNA (207bp) protein (69aa)
Transcriptional regulator, MarR family n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S859_FINMA
MarR family transcriptional regulator
Transcriptional regulator, MarR family {ECO:0000313|EMBL:EGS34421.1}; TaxID=866779 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna SY
Displaying 30 items

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