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NECEvent2014_2_3_scaffold_245

Alias: 172_003_scaffold_245

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_245_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(191..748)
DNA (558bp) protein (186aa)
Ribosome-recycling factor n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH5_9FIRM rbh
Ribosome-recycling factor {ECO:0000256|HAMAP-Rule:MF_00040}; Short=RRF {ECO:0000256|HAMAP-Rule:MF_00040};; Ribosome-releasing factor {ECO:0000256|HAMAP-Rule:MF_00040}; TaxID=908338 species="Bacteria;
frr; Ribosome-recycling factor
NECEvent2014_2_3_scaffold_245_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(758..1462)
DNA (705bp) protein (235aa)
Uridylate kinase {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197273}; Short=UK {ECO:0000256|HAMAP-Rule:MF_01220};; EC=2.7.4.22 {ECO:0000256|HAMAP-Rule:MF_01220, ECO:0000256|SAAS:SAAS00197
pyrH; Uridylate kinase (EC:2.7.4.22)
Uridylate kinase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH4_9FIRM rbh
NECEvent2014_2_3_scaffold_245_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1479..2123)
DNA (645bp) protein (215aa)
Elongation factor Ts n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH3_9FIRM rbh
Elongation factor Ts {ECO:0000256|HAMAP-Rule:MF_00050, ECO:0000256|RuleBase:RU000642}; Short=EF-Ts {ECO:0000256|HAMAP-Rule:MF_00050};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridi
tsf; Elongation factor Ts
NECEvent2014_2_3_scaffold_245_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(2195..2968)
DNA (774bp) protein (258aa)
30S ribosomal protein S2 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH2_9FIRM rbh
30S ribosomal protein S2 {ECO:0000256|HAMAP-Rule:MF_00291}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-14
rpsB; 30S ribosomal protein S2
NECEvent2014_2_3_scaffold_245_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3214..3756)
DNA (543bp) protein (181aa)
Rubredoxin n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH1_9FIRM rbh
Rubredoxin {ECO:0000313|EMBL:EFR33086.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b.;"
rubrerythrin
NECEvent2014_2_3_scaffold_245_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3866..4933)
DNA (1068bp) protein (356aa)
Peptide chain release factor 1 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYH0_9FIRM rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae
prfA; Peptide chain release factor 1
NECEvent2014_2_3_scaffold_245_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4942..5772)
DNA (831bp) protein (277aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
hemK; protein-(glutamine-N5) methyltransferase (EC:2.1.1.-)
Release factor glutamine methyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG9_9FIRM rbh
NECEvent2014_2_3_scaffold_245_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(5803..6018)
DNA (216bp) protein (72aa)
50S ribosomal protein L31 n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG8_9FIRM
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" so
hypothetical protein
NECEvent2014_2_3_scaffold_245_9
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6167..7591)
DNA (1425bp) protein (475aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=908338 specie
rho; Transcription termination factor Rho (EC:3.6.4.-)
Transcription termination factor Rho n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG7_9FIRM rbh
NECEvent2014_2_3_scaffold_245_10
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7600..8565)
DNA (966bp) protein (322aa)
glpX; Fructose-1,6-bisphosphatase class 2 (EC:3.1.3.11)
Fructose-1,6-bisphosphatase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG6_9FIRM rbh
Fructose-1,6-bisphosphatase {ECO:0000256|PIRNR:PIRNR004532}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-1
NECEvent2014_2_3_scaffold_245_11
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8567..9220)
DNA (654bp) protein (218aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Pepton
transaldolase (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG5_9FIRM rbh
NECEvent2014_2_3_scaffold_245_12
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9226..9702)
DNA (477bp) protein (159aa)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG4_9FIRM rbh
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase
NECEvent2014_2_3_scaffold_245_13
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9666..10400)
DNA (735bp) protein (245aa)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108, ECO:0000256|SAAS:SAAS00030493};
ispD; 4-diphosphocytidyl-2-C-methyl-D-erythritolsynthase (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG3_9FIRM rbh
NECEvent2014_2_3_scaffold_245_14
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10393..11847)
DNA (1455bp) protein (485aa)
Penicillin-binding protein, transpeptidase domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG2_9FIRM rbh
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFR33135.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" sourc
ftsI; cell division protein FtsI/penicillin-binding protein 2
NECEvent2014_2_3_scaffold_245_15
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11840..13105)
DNA (1266bp) protein (422aa)
Cell cycle protein, FtsW/RodA/SpoVE family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYG1_9FIRM rbh
Cell cycle protein, FtsW/RodA/SpoVE family {ECO:0000313|EMBL:EFR33054.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilu
cell cycle protein, FtsW/RodA/SpoVE family
NECEvent2014_2_3_scaffold_245_16
Peptoniphilus sp. oral taxon 836, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13095..13550)
DNA (456bp) protein (152aa)
signal peptide protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003070198
FHA domain protein {ECO:0000313|EMBL:EFK38581.1}; TaxID=768724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 836 str
FHA domain protein
NECEvent2014_2_3_scaffold_245_17
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13676..14284
DNA (609bp) protein (203aa)
Regulatory protein RecX n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF9_9FIRM rbh
Regulatory protein RecX {ECO:0000256|HAMAP-Rule:MF_01114, ECO:0000256|SAAS:SAAS00093789}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" sour
hypothetical protein
NECEvent2014_2_3_scaffold_245_18
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14285..14581
DNA (297bp) protein (99aa)
GIY-YIG catalytic domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF8_9FIRM
GIY-YIG catalytic domain protein {ECO:0000313|EMBL:EFR33121.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
putative endonuclease containing a URI domain
NECEvent2014_2_3_scaffold_245_19
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14621..16453)
DNA (1833bp) protein (611aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF7_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33116.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_245_20
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16462..17406)
DNA (945bp) protein (315aa)
NurA domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF6_9FIRM rbh
NurA domain protein {ECO:0000313|EMBL:EFR33087.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-Sch2b
NurA domain protein
NECEvent2014_2_3_scaffold_245_21
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17364..18197)
DNA (834bp) protein (278aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
rsmI; Ribosomal RNA small subunit methyltransferase I (EC:2.1.1.198)
Ribosomal RNA small subunit methyltransferase I n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF5_9FIRM rbh
NECEvent2014_2_3_scaffold_245_22
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18170..18883)
DNA (714bp) protein (238aa)
hypothetical protein n=1 Tax=Peptoniphilus sp. JC140 RepID=UPI0003065556 rbh
putative SAM-dependent methyltransferase
Methyltransferase small domain protein {ECO:0000313|EMBL:EFR33040.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus ha
NECEvent2014_2_3_scaffold_245_23
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18847..20058)
DNA (1212bp) protein (404aa)
Bacterial capsule synthesis protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF2_9FIRM rbh
Bacterial capsule synthesis protein {ECO:0000313|EMBL:EFR33113.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei
CapA domain protein
NECEvent2014_2_3_scaffold_245_24
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20010..20666)
DNA (657bp) protein (219aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF1_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33090.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
DNA integration/recombination/invertion protein
NECEvent2014_2_3_scaffold_245_25
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20688..21464)
DNA (777bp) protein (259aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=908338
lgt; Prolipoprotein diacylglyceryl transferase (EC:2.4.99.-)
Prolipoprotein diacylglyceryl transferase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYF0_9FIRM rbh
NECEvent2014_2_3_scaffold_245_26
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21455..22087)
DNA (633bp) protein (211aa)
Deoxyribose-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256|SAAS:SAAS00058202}; Short=DERA {ECO:0000256|HAMAP-Rule:MF_00114};; EC=4.1.2.4 {ECO:0000256|HAMAP-Rule:MF_00114, ECO:0000256
deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KYE9_9FIRM rbh
Displaying 26 items

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