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NECEvent2014_2_3_scaffold_250

Alias: 172_003_scaffold_250

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_250_1
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(363..1121)
DNA (759bp) protein (253aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX77_9FIRM rbh
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EFR33560.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus
fabG; 3-ketoacyl-ACP reductase
NECEvent2014_2_3_scaffold_250_2
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1205..1516)
DNA (312bp) protein (104aa)
Transcriptional regulator, PadR family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX78_9FIRM
Transcriptional regulator, PadR family {ECO:0000313|EMBL:EFR33551.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus ha
PadR family transcriptional regulator
NECEvent2014_2_3_scaffold_250_3
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1519..2760)
DNA (1242bp) protein (414aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX79_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33578.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
NECEvent2014_2_3_scaffold_250_4
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3056..3883)
DNA (828bp) protein (276aa)
Methyltransferase domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX80_9FIRM rbh
Methyltransferase domain protein {ECO:0000313|EMBL:EFR33547.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
type 11 methyltransferase
NECEvent2014_2_3_scaffold_250_5
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3968..4606)
DNA (639bp) protein (213aa)
Putative uncharacterized protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX81_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFR33568.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei AC
hypothetical protein
NECEvent2014_2_3_scaffold_250_6
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4906..5577)
DNA (672bp) protein (224aa)
Mg2+ transporter-C family protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX82_9FIRM rbh
Mg2+ transporter-C family protein {ECO:0000313|EMBL:EFR33535.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei A
putative cation-transporting P-type ATPase
NECEvent2014_2_3_scaffold_250_7
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5819..6040)
DNA (222bp) protein (74aa)
Conserved domain protein n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX83_9FIRM
Conserved domain protein {ECO:0000313|EMBL:EFR33586.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus harei ACS-146-V-
hypothetical protein
NECEvent2014_2_3_scaffold_250_8
Peptoniphilus harei, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6188..6445
DNA (258bp) protein (86aa)
Transcriptional regulator, AbrB family n=1 Tax=Peptoniphilus harei ACS-146-V-Sch2b RepID=E4KX84_9FIRM
Transcriptional regulator, AbrB family {ECO:0000313|EMBL:EFR33567.1}; TaxID=908338 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus ha
AbrB family transcriptional regulator
NECEvent2014_2_3_scaffold_250_9
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6445..6711
DNA (267bp) protein (89aa)
Addiction module toxin, RelE/StbE family n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6T8_FINMA
Addiction module toxin, RelE/StbE family {ECO:0000313|EMBL:EGS30795.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus
RelE/StbE family addiction module toxin
NECEvent2014_2_3_scaffold_250_10
Peptoniphilus duerdenii, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6902..8044)
DNA (1143bp) protein (381aa)
Divergent AAA domain protein n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NK20_9FIRM rbh
Divergent AAA domain protein {ECO:0000313|EMBL:EFM25965.1}; TaxID=862517 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus duerdenii AT
putative Abi-alpha protein
NECEvent2014_2_3_scaffold_250_11
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8171..8605)
DNA (435bp) protein (145aa)
Abi-like protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MU51_9FIRM
Abi-like protein {ECO:0000313|EMBL:EGS30561.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral taxon 375 str.
Abi-like protein
NECEvent2014_2_3_scaffold_250_12
Peptoniphilus sp. oral taxon 375, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9291..9671)
DNA (381bp) protein (127aa)
HNH endonuclease domain protein n=1 Tax=Peptoniphilus sp. oral taxon 375 str. F0436 RepID=F9MU50_9FIRM
HNH endonuclease domain protein {ECO:0000313|EMBL:EGS30543.1}; TaxID=879308 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus sp. oral
hypothetical protein
NECEvent2014_2_3_scaffold_250_13
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9848..10405)
DNA (558bp) protein (186aa)
Uncharacterized protein n=2 Tax=Fusobacterium necrophorum RepID=E5BM75_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EJU17898.1}; TaxID=1161424 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. fundu
NECEvent2014_2_3_scaffold_250_14
Fusobacterium necrophorum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(10377..11195)
DNA (819bp) protein (273aa)
Uncharacterized protein n=2 Tax=Fusobacterium necrophorum RepID=E5BM74_9FUSO
Uncharacterized protein {ECO:0000313|EMBL:EJU17901.1}; TaxID=1161424 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium necrophorum subsp. fundu
NECEvent2014_2_3_scaffold_250_15
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11198..11608)
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NR69_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31691.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
intron RNA domain IV
NECEvent2014_2_3_scaffold_250_16
Streptococcus suis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11649..12029)
DNA (381bp) protein (127aa)
Uncharacterized protein n=5 Tax=Streptococcus RepID=R4NIP9_STRSU
FIG00627694: hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGL47520.1}; TaxID=1276647 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus suis TL13.;"
NECEvent2014_2_3_scaffold_250_17
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12559..14226)
DNA (1668bp) protein (556aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NR72_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHR31666.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
NECEvent2014_2_3_scaffold_250_18
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14177..14467)
DNA (291bp) protein (97aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NR73_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR31667.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
NECEvent2014_2_3_scaffold_250_19
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14473..15444)
DNA (972bp) protein (324aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NR74_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EHR31668.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
hypothetical protein
NECEvent2014_2_3_scaffold_250_20
unknown

Not on your lists

comp(15838..15960)
DNA (123bp) protein (41aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_250_21
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16192..17613)
DNA (1422bp) protein (474aa)
MATE efflux family protein n=1 Tax=Streptococcus dysgalactiae subsp. equisimilis SK1250 RepID=F9NIZ1_STREQ rbh
MATE efflux family protein {ECO:0000313|EMBL:EFA89938.1}; TaxID=596330 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis 315
MATE family transporter
NECEvent2014_2_3_scaffold_250_22
Megasphaera sp. UPII 135-E, Megasphaera, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17582..20056)
DNA (2475bp) protein (825aa)
Putative pyruvate, water dikinase n=1 Tax=Megasphaera sp. UPII 135-E RepID=F9MMX0_9FIRM rbh
Putative pyruvate, water dikinase {ECO:0000313|EMBL:EGS35616.1}; TaxID=1000569 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megasphaera.;" source="Megasphaera sp. UP
phosphoenolpyruvate synthase
NECEvent2014_2_3_scaffold_250_23
Peptostreptococcus sp. MV1, Peptostreptococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20080..20676)
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Peptostreptococcus anaerobius 653-L RepID=D3MSU3_9FIRM rbh
TetR family transcriptional regulator {ECO:0000313|EMBL:KGF14690.1}; TaxID=1219626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptostreptococcus.;" source="Peptos
TetR family transcriptional regulator
NECEvent2014_2_3_scaffold_250_24
unknown

Not on your lists

21021..21134
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_2_3_scaffold_250_25
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21094..21357
DNA (264bp) protein (88aa)
hypothetical protein n=1 Tax=Allofustis seminis RepID=UPI0003709EBC
FIG01119645: hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFH92716.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
Displaying 25 items

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