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NECEvent2014_2_3_scaffold_335

Alias: 172_003_scaffold_335

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_3_scaffold_335_1
Anaerococcus vaginalis, Anaerococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..661
DNA (660bp) protein (220aa)
MATE efflux family protein n=1 Tax=Anaerococcus vaginalis ATCC 51170 RepID=C7HT48_9FIRM
MATE efflux family protein {ECO:0000313|EMBL:EEU13314.1}; TaxID=655811 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Anaerococcus.;" source="Anaerococcus vaginalis ATCC 5
Na+driven multidrug efflux pump
NECEvent2014_2_3_scaffold_335_2
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1291..1500
DNA (210bp) protein (70aa)
hypothetical protein n=1 Tax=Anaerococcus obesiensis RepID=UPI0002F2E431
Uncharacterized protein {ECO:0000313|EMBL:KGF30026.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00
NECEvent2014_2_3_scaffold_335_3
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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1560..2072
DNA (513bp) protein (171aa)
Resolvase, N-terminal domain protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6Q4_FINMA
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFH93758.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC
DNA recombinase
NECEvent2014_2_3_scaffold_335_4
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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2109..3122
DNA (1014bp) protein (338aa)
Resolvase, N-terminal domain protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6Q4_FINMA rbh
Recombinase {ECO:0000313|EMBL:KGF30027.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
resolvase family site-specific recombinase
NECEvent2014_2_3_scaffold_335_5
Peptoniphilus lacrimalis, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3115..3531
DNA (417bp) protein (139aa)
Recombinase n=1 Tax=Peptoniphilus duerdenii ATCC BAA-1640 RepID=E0NK18_9FIRM
Integrase {ECO:0000313|EMBL:KGF30028.1}; TaxID=1401070 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;" source="Peptoniphilus lacrimalis DNF00528.;"
recombinase
NECEvent2014_2_3_scaffold_335_6
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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3521..5086
DNA (1566bp) protein (522aa)
Resolvase, N-terminal domain protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6Q2_FINMA rbh
Resolvase, N-terminal domain protein {ECO:0000313|EMBL:EFH93756.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC
Resolvase
NECEvent2014_2_3_scaffold_335_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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5077..5796
DNA (720bp) protein (240aa)
Transcriptional regulator, TetR family n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6Q1_FINMA rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EFH93755.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna AT
TetR family transcriptional regulator
NECEvent2014_2_3_scaffold_335_8
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5919..6515
DNA (597bp) protein (199aa)
TIGR02185 family protein n=2 Tax=Firmicutes RepID=U7USU8_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF10417.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteriu
hypothetical protein
NECEvent2014_2_3_scaffold_335_9
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6505..7218
DNA (714bp) protein (238aa)
Cobalt transport protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MDT6_9FIRM rbh
ABC transporter permease {ECO:0000313|EMBL:KGF10416.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri
ABC transporter permease
NECEvent2014_2_3_scaffold_335_10
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7203..8672
DNA (1470bp) protein (490aa)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoramibacter alactolyticus ATCC 23263 RepID=E6MDT7_9FIRM rbh
ABC transporter {ECO:0000313|EMBL:KGF10415.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacterium S5-A11
ABC transporter ATP-binding protein
NECEvent2014_2_3_scaffold_335_11
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8662..10452
DNA (1791bp) protein (597aa)
Xenobiotic ABC transporter ATPase n=3 Tax=Firmicutes RepID=J8T789_STRAG rbh
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGF10414.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridia
ABC-type multidrug transport system, ATPase and permease components
NECEvent2014_2_3_scaffold_335_12
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10445..12190
DNA (1746bp) protein (582aa)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6P6_FINMA rbh
ABC transporter permease {ECO:0000313|EMBL:KGF10413.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacteri
ABC-type multidrug transport system, ATPase and permease components
NECEvent2014_2_3_scaffold_335_13
Clostridiales bacterium S5-A11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12217..13569
DNA (1353bp) protein (451aa)
MATE efflux family protein n=2 Tax=Clostridiales Family XI. Incertae Sedis RepID=D6S6P5_FINMA rbh
Multidrug transporter MatE {ECO:0000313|EMBL:KGF10412.1}; TaxID=1230730 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XI. Incertae Sedis.;" source="Clostridiales bacte
putative drug/sodium antiporter, MATEfamily,Tn1549-like, CTn2-Orf29
NECEvent2014_2_3_scaffold_335_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13812..14048
DNA (237bp) protein (79aa)
Putative sigma factor Tn1549-like, CTn2-Orf31 n=1 Tax=Clostridium difficile (strain 630) RepID=Q188M6_CLOD6
sigma facto
Putative sigma factor Tn1549-like, CTn2-Orf31 {ECO:0000313|EMBL:CEJ96956.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Pep
NECEvent2014_2_3_scaffold_335_15
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14024..14296
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6S6P3_FINMA
Uncharacterized protein {ECO:0000313|EMBL:EFH93747.1}; TaxID=525282 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Finegoldia.;" source="Finegoldia magna ATCC 53516.;"
sigma-70, region 4 subfamily
Displaying 15 items

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