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NECEvent2014_2_3_scaffold_3308_1

Organism: NECEvent2014_2_3_Actinomycetales_HPA0247-rel_57_22_partial

partial RP 32 / 55 MC: 2 BSCG 26 / 51 ASCG 5 / 38
Location: comp(175..1020)

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 281.0
  • Bit_score: 549
  • Evalue 2.20e-153
DNA-directed RNA polymerase subunit beta' n=1 Tax=Actinomyces neuii BVS029A5 RepID=K0Z4Z4_9ACTO similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 281.0
  • Bit_score: 549
  • Evalue 1.60e-153
DNA-directed RNA polymerase subunit beta' similarity KEGG
DB: KEGG
  • Identity: 72.1
  • Coverage: 262.0
  • Bit_score: 368
  • Evalue 1.80e-99

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Taxonomy

Actinomyces neuii → Actinomyces → Actinomycetales → Actinobacteria → Actinobacteria → Bacteria

Sequences

DNA sequence
Length: 846
GCTTCGGACATTACCCAGGGTCTGCCCCGTGTGCAGGAGCTCTTCGAAGCTCGTACCCCGAAGGGTGAAGCTGCGATCACCGAGGCCGCCGGCCGCGTGAAGATCGTCGACGAAGCAGACGGCCCGCGCGTGGTTACCATTACCCGCGACGACGGTGAAGCCGACCTCGAGATCGAGGTTTCGCGCCGCCAGAAGCTGCTGGTAAAGGACGGCGACCATGTGGGCGTCGGACAGCAGTTGGTCGAAGGCCGTGTAGACCCCAAGAAGGTGCTGCGCGTCCTCGGCGTGAACGCCACCCAGAAGCAGTTGGTTGACGAAGTGCAGGAAGTGTACCGTTCCCAGGGCGTGGATATTCACGCCAAGCACGTCGAAGTCATTGTGCGCCAGATGCTGCGCCGCGTGACCGTGCTGGATTCGGGCGACACCAAGTTGCTGCCCGGCGAACTGGTAGACACTATGCGTTTCCGCGACGAGAACAGGCGGACCGTGGCCGAGGGCGGCAAGCCCGCTGCGGGCCGTCCTGAGCTGATGGGTATCACCAAGGCGTCGCTGGCAACGGATTCTTGGCTATCTGCAGCATCCTTCCAGGAAACCACCAAGGTCCTGACAGAAGCTGCTATGAACGGCAAGGACGATCCGCTGCTCGGCCTCAAGGAAAACGTTATCCTTGGTAAGTTGATCCCGGCCGGTACCGGCCTGAGCAACTACCAGCACGTGAACGTAGAGCCCACCGCCGAGGCGATGGCTAACGTTGGCTGGTCTGAAGATGACTTCCGCGTAGGCGAGGTAGACGATGATTTCTTGGCAGGAATCAACTTCGAAACCGCCTTCCGCAACGGTCTGTAA
PROTEIN sequence
Length: 282
ASDITQGLPRVQELFEARTPKGEAAITEAAGRVKIVDEADGPRVVTITRDDGEADLEIEVSRRQKLLVKDGDHVGVGQQLVEGRVDPKKVLRVLGVNATQKQLVDEVQEVYRSQGVDIHAKHVEVIVRQMLRRVTVLDSGDTKLLPGELVDTMRFRDENRRTVAEGGKPAAGRPELMGITKASLATDSWLSAASFQETTKVLTEAAMNGKDDPLLGLKENVILGKLIPAGTGLSNYQHVNVEPTAEAMANVGWSEDDFRVGEVDDDFLAGINFETAFRNGL*