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NECEvent2014_2_5_scaffold_60

Alias: 172_005_scaffold_60

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Displaying 9 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_5_scaffold_60_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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140..856
DNA (717bp) protein (239aa)
Two-component response regulator n=2 Tax=Clostridium difficile RepID=C9XM50_CLODC rbh
two-component response regulator
Two-component response regulator {ECO:0000313|EMBL:CBE02769.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_5_scaffold_60_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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859..1788
DNA (930bp) protein (310aa)
two-component sensor histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclost
Two-component sensor histidine kinase n=27 Tax=Clostridium difficile RepID=Q18A16_CLOD6 rbh
NECEvent2014_2_5_scaffold_60_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1936..2859
DNA (924bp) protein (308aa)
ABC-type transport system, multidrug-familyATP-binding protein (EC:3.6.3.-)
ABC-type transport system, multidrug-family ATP-binding protein {ECO:0000313|EMBL:CCL20938.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL20938.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clost
ABC-type transport system, multidrug-family ATP-binding protein n=181 Tax=Clostridium difficile RepID=Q18A20_CLOD6 rbh
NECEvent2014_2_5_scaffold_60_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2843..3613
DNA (771bp) protein (257aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=G6BUV4_CLODI rbh
lantibiotic ABC transporter permease
Putative lantibiotic ABC transporter, permease protein {ECO:0000313|EMBL:CBE02774.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;"
NECEvent2014_2_5_scaffold_60_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3623..4405
DNA (783bp) protein (261aa)
ABC-2 transporter family protein n=133 Tax=Clostridium difficile RepID=T3I3I4_CLODC rbh
ABC-type transport system, multidrug-familypermease
ABC-2 transporter family protein {ECO:0000313|EMBL:EQE68652.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostrid
NECEvent2014_2_5_scaffold_60_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4782..5318
DNA (537bp) protein (179aa)
Rubrerythrin n=199 Tax=Clostridium difficile RepID=C9XM55_CLODC rbh
rbr; rubrerythrin
Rubrerythrin family protein {ECO:0000313|EMBL:EQG78340.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_5_scaffold_60_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5350..5739
DNA (390bp) protein (130aa)
Ferric uptake regulator family protein n=26 Tax=Clostridium difficile RepID=T3I4F4_CLODC
ferric-uptake regulator
Putative ferric-uptake regulator {ECO:0000313|EMBL:CAJ67660.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridi
NECEvent2014_2_5_scaffold_60_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5776..6162
DNA (387bp) protein (129aa)
rbo; Rubredoxin oxidoreductase (desulfoferrodoxin) (EC:1.15.1.1)
Desulfoferrodoxin ferrous iron-binding domain protein n=185 Tax=Clostridium difficile RepID=T3I3E8_CLODC
Putative superoxide reductase {ECO:0000313|EMBL:EHJ31148.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium
NECEvent2014_2_5_scaffold_60_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6289..7722
DNA (1434bp) protein (478aa)
Rubredoxin family protein n=156 Tax=Clostridium difficile RepID=T3I8C9_CLODC rbh
putative oxidative stress glutamate synthase
Rubredoxin family protein {ECO:0000313|EMBL:EQE68594.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
Displaying 9 items

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