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NECEvent2014_2_5_scaffold_118

Alias: 172_005_scaffold_118

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_5_scaffold_118_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(131..337)
DNA (207bp) protein (69aa)
Helix-turn-helix domain protein n=4 Tax=Clostridium difficile RepID=T2U5B6_CLODI
hypothetical protein
Transcriptional regulator {ECO:0000313|EMBL:KEY32900.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp
NECEvent2014_2_5_scaffold_118_2
unknown

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comp(389..808)
DNA (420bp) protein (140aa)
RNA polymerase sigma factor, sigma-70 family n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A9H8_9FIRM
DNA-directed RNA polymerase specialized sigma subunit
DNA-directed RNA polymerase specialized sigma subunit {ECO:0000313|EMBL:CBL37706.1}; TaxID=245018 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SSC/2
NECEvent2014_2_5_scaffold_118_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1103..1477)
DNA (375bp) protein (125aa)
Transcriptional regulator, GntR family,Tn916-like, CTn1-Orf5 n=4 Tax=Clostridium difficile RepID=Q18D99_CLOD6
Transcriptional regulator, GntRfamily,Tn916-like, CTn1-Orf5
Transcriptional regulator, GntR family,Tn916-like, CTn1-Orf5 {ECO:0000313|EMBL:CAJ67182.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
NECEvent2014_2_5_scaffold_118_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1526..2527)
DNA (1002bp) protein (334aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CKH73459.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptos
Two-component sensor histidine kinase Tn916-like,CTn1-Orf6 n=3 Tax=Clostridium difficile RepID=Q18D98_CLOD6 rbh
Two-component sensor histidine kinaseTn916-like,CTn1-Orf6
NECEvent2014_2_5_scaffold_118_5
Streptococcus equinus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(2524..3207)
DNA (684bp) protein (228aa)
Response regulator receiver domain protein n=1 Tax=Clostridium difficile 70-100-2010 RepID=G6BT88_CLODI rbh
Putative phage tail component domain protein {ECO:0000313|EMBL:EFM27388.1}; TaxID=864569 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococc
Two-component response regulatorTn916-like,CTn1-Orf7
NECEvent2014_2_5_scaffold_118_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3242..4537)
DNA (1296bp) protein (432aa)
FtsX-like permease family protein n=2 Tax=Clostridium difficile RepID=T4PSA0_CLODI rbh
ABC-type transport system, permeaseTn916-like,CTn1-Orf8
ABC-type transport system, permease Tn916-like,CTn1-Orf8 {ECO:0000313|EMBL:CAJ67185.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;
Displaying 6 items

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