Alias: 172_005_scaffold_41
name | lists | location/seqs | annotations | notes |
---|---|---|---|---|
NECEvent2014_2_5_scaffold_41_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
252..455
|
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4P657_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ63174.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffi
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NECEvent2014_2_5_scaffold_41_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
542..1516
|
Helix-turn-helix domain protein n=7 Tax=Clostridium difficile RepID=T2U2E2_CLODI
rbh
putative conjugative transposon proteinTn1549-like, CTn4-Orf1
Putative conjugative transposon protein Tn1549-like, CTn4-Orf1 {ECO:0000313|EMBL:CAJ67968.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
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NECEvent2014_2_5_scaffold_41_3
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
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Not on your lists |
1537..1755
|
Uncharacterized protein n=10 Tax=root RepID=A7VRN3_9CLOT
conjugative transposon protein
Uncharacterized protein {ECO:0000313|EMBL:EGX68191.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_
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NECEvent2014_2_5_scaffold_41_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
1838..2314
|
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=T2U1L6_CLODI
rbh
putative conjugative transposon proteinTn1549-like, CTn4-Orf3
Putative ATPase of the AAA superfamily {ECO:0000313|EMBL:CKG94077.1}; Putative conjugative transposon proteinTn1549-like, CTn4-Orf3 {ECO:0000313|EMBL:CEJ97684.1}; TaxID=1496 species="Bacteria; Firmicu
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NECEvent2014_2_5_scaffold_41_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
2311..4098
|
Type IV secretory system Conjugative DNA transfer family protein n=4 Tax=Clostridium difficile RepID=T2U2C6_CLODI
rbh
Putative conjugative transfer proteinTn1549-like, CTn4-Orf4 {ECO:0000313|EMBL:CEJ97683.1}; TRAG family protein {ECO:0000313|EMBL:CKG94051.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clos
conjugative transfer protein
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100% identity to conjugal transfer protein TraG from Peptoclostridium difficile
Jill Banfield
(7/8/14)
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NECEvent2014_2_5_scaffold_41_6
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria
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Not on your lists |
4091..4258
|
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=U3W6F9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EGX68188.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_
hypothetical protein
|
|
NECEvent2014_2_5_scaffold_41_7
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4458..4673
|
Uncharacterized protein n=2 Tax=root RepID=A7VRM9_9CLOT
conjugative transposon protein
Uncharacterized protein {ECO:0000313|EMBL:EDO61709.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753
|
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NECEvent2014_2_5_scaffold_41_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
4690..5559
|
Uncharacterized protein n=9 Tax=Firmicutes RepID=N9WL36_CLOIN
rbh
membrane protein
Putative membrane protein Tn1549-like,CTn4-Orf7 {ECO:0000313|EMBL:CEJ97680.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
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NECEvent2014_2_5_scaffold_41_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
5581..5985
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf8 n=1 Tax=Clostridium difficile (strain 630) RepID=Q18AX0_CLOD6
conjugative transposon protein
Putative conjugative transposon protein Tn1549-like, CTn4-Orf8 {ECO:0000313|EMBL:CAJ67961.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostri
|
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NECEvent2014_2_5_scaffold_41_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
5933..8362
|
conjugal transfer protein TraE n=1 Tax=Clostridium difficile RepID=UPI00017F5FAE
rbh
putative hydrolase Tn1549-like, CTn4-Orf9
Putative hydrolase Tn1549-like, CTn4-Orf9 {ECO:0000313|EMBL:CEJ97678.1}; TraE protein {ECO:0000313|EMBL:CKG93966.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptoco
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NECEvent2014_2_5_scaffold_41_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
8359..9318
|
DNA-methyltransferase (EC:2.1.1.113)
DNA-methyltransferase, cytosine-N4-specific Tn1549-like, CTn4-Orf10 {ECO:0000313|EMBL:CAJ67959.1}; EC=2.1.1.113 {ECO:0000313|EMBL:CAJ67959.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia;
DNA-methyltransferase, cytosine-N4-specific Tn1549-like, CTn4-Orf10 n=3 Tax=Clostridium difficile RepID=Q18AW5_CLOD6
rbh
|
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NECEvent2014_2_5_scaffold_41_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
9345..11285
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf11 n=1 Tax=Clostridium difficile (strain 630) RepID=Q18AW6_CLOD6
rbh
Putative conjugative transposon protein Tn1549-like, CTn4-Orf11 {ECO:0000313|EMBL:CAJ67958.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
putative conjugative transposon proteinTn1549-like, CTn4-Orf11
|
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NECEvent2014_2_5_scaffold_41_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11317..11574
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf12 n=2 Tax=Clostridium difficile RepID=Q18AW7_CLOD6
conjugative transposon protein
Putative conjugative transposon proteinTn1549-like, CTn4-Orf12 {ECO:0000313|EMBL:CEJ97675.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG93890.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
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NECEvent2014_2_5_scaffold_41_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
11564..12292
|
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=T2U1J7_CLODI
rbh
cell surface protein
Putative cell surface protein Tn1549-like,CTn4-Orf13 {ECO:0000313|EMBL:CAJ67956.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
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NECEvent2014_2_5_scaffold_41_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12289..12477
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf14 n=1 Tax=Clostridium difficile (strain 630) RepID=Q18AW0_CLOD6
putative conjugative transposon proteinTn1549-like, CTn4-Orf14
Putative conjugative transposon proteinTn1549-like, CTn4-Orf14 {ECO:0000313|EMBL:CEJ97673.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridi
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NECEvent2014_2_5_scaffold_41_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
12494..14584
|
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=1496 species="Bacteria; Firmicutes;
topB; DNA topoisomerase III; Tn1549-like, CTn4-Orf15 (EC:5.99.1.2)
DNA topoisomerase n=3 Tax=Clostridium difficile RepID=T2U2A8_CLODI
rbh
|
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NECEvent2014_2_5_scaffold_41_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
14717..18748
|
YodL-like family protein n=4 Tax=Clostridium difficile RepID=T2U2Y5_CLODI
rbh
putative antirestriction proteinTn1549-like,CTn4-Orf16
Domain of uncharacterised function (DUF955)./Antirestriction protein (ArdA) {ECO:0000313|EMBL:CKG93809.1}; Putative antirestriction proteinTn1549-like,CTn4-Orf16 {ECO:0000313|EMBL:CEJ97671.1}; TaxID=1
|
100% ID to DNA primase in Peptoclostridium difficile
Jill Banfield
(7/8/14)
|
NECEvent2014_2_5_scaffold_41_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
18751..18957
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf17 n=2 Tax=Clostridium difficile RepID=Q18AW3_CLOD6
putative conjugative transposon proteinTn1549-like, CTn4-Orf17
Putative conjugative transposon protein Tn1549-like, CTn4-Orf17 {ECO:0000313|EMBL:CAJ67952.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
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NECEvent2014_2_5_scaffold_41_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
18954..19319
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf18 n=1 Tax=Clostridium difficile (strain 630) RepID=Q18AW4_CLOD6
putative conjugative transposon proteinTn1549-like, CTn4-Orf18
Putative conjugative transposon proteinTn1549-like, CTn4-Orf18 {ECO:0000313|EMBL:CEJ97669.1}; Uncharacterised protein {ECO:0000313|EMBL:CKG93755.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridi
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NECEvent2014_2_5_scaffold_41_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(19497..19916)
|
Putative conjugative transposon protein Tn1549-like, CTn4-Orf19 n=6 Tax=Clostridium difficile RepID=Q18AV4_CLOD6
rbh
putative conjugative transposon proteinTn1549-like, CTn4-Orf19
Putative conjugative transposon protein Tn1549-like, CTn4-Orf19 {ECO:0000313|EMBL:CAJ67950.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
|
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NECEvent2014_2_5_scaffold_41_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
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Not on your lists |
comp(20185..20295)
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Putative membrane protein n=1 Tax=Clostridium difficile P28 RepID=T4P6D4_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:EQJ63157.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium dif
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NECEvent2014_2_5_scaffold_41_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(20300..20530)
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Putative conjugative transposon protein Tn1549-like, CTn4-Orf21 n=2 Tax=Clostridium difficile RepID=Q18AV6_CLOD6
putative conjugative transposon proteinTn1549-like, CTn4-Orf21
Putative conjugative transposon protein Tn1549-like, CTn4-Orf21 {ECO:0000313|EMBL:CAJ67948.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostr
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NECEvent2014_2_5_scaffold_41_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria
|
Not on your lists |
comp(20623..21966)
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Relaxase/mobilization nuclease domain protein n=1 Tax=Clostridium difficile CD13 RepID=T2U2C3_CLODI
rbh
endonuclease relaxase
Putative endonuclease relaxaseTn1549-like,CTn4-Orf22 {ECO:0000313|EMBL:CEJ97665.1}; Relaxase/Mobilisation nuclease domain {ECO:0000313|EMBL:CKG93675.1}; TaxID=1496 species="Bacteria; Firmicutes; Clost
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