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NECEvent2014_2_8_scaffold_309

Alias: 172_008_scaffold_309

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_8_scaffold_309_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1380
DNA (1380bp) protein (460aa)
DHHA1 domain protein n=172 Tax=Clostridium difficile RepID=C9XSW0_CLODC rbh
RNA/single-stranded DNA exonuclease
Putative signal transduction phosphoesterase {ECO:0000313|EMBL:CCK96159.1}; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="P
NECEvent2014_2_8_scaffold_309_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1381..1830
DNA (450bp) protein (150aa)
50S ribosomal protein L9 n=214 Tax=Clostridium difficile RepID=RL9_CLOD6
rplI; 50S ribosomal protein L9
50S ribosomal protein L9 {ECO:0000256|HAMAP-Rule:MF_00503}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium d
NECEvent2014_2_8_scaffold_309_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1849..3177
DNA (1329bp) protein (443aa)
Replicative DNA helicase {ECO:0000313|EMBL:CCL00140.1}; EC=3.6.1.- {ECO:0000313|EMBL:CCL00140.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoc
Replicative DNA helicase n=213 Tax=Clostridium difficile RepID=C9XSV8_CLODC rbh
replicative DNA helicase
NECEvent2014_2_8_scaffold_309_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3382..3690
DNA (309bp) protein (103aa)
Uncharacterized protein n=33 Tax=Clostridium difficile RepID=T3FXJ3_CLODC
conserved hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG66469.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS93307.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae
NECEvent2014_2_8_scaffold_309_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3772..5061
DNA (1290bp) protein (430aa)
purA; adenylosuccinate synthetase (EC:6.3.4.4)
Adenylosuccinate synthetase {ECO:0000256|HAMAP-Rule:MF_00011, ECO:0000256|RuleBase:RU000520}; Short=AMPSase {ECO:0000256|HAMAP-Rule:MF_00011};; Short=AdSS {ECO:0000256|HAMAP-Rule:MF_00011};; EC=6.3.4.
Adenylosuccinate synthetase n=195 Tax=Clostridium difficile RepID=PURA_CLOD6 rbh
NECEvent2014_2_8_scaffold_309_trna_1
unknown

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5387..5459
DNA (73bp)
transferRNA
NECEvent2014_2_8_scaffold_309_trna_2
unknown

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5469..5540
DNA (72bp)
transferRNA
NECEvent2014_2_8_scaffold_309_trna_3
unknown

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5548..5620
DNA (73bp)
transferRNA
NECEvent2014_2_8_scaffold_309_trna_4
unknown

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5657..5728
DNA (72bp)
transferRNA
NECEvent2014_2_8_scaffold_309_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6114..7106)
DNA (993bp) protein (331aa)
IstB-like ATP binding family protein n=190 Tax=Clostridium difficile RepID=T3G1F1_CLODC rbh
dnaC; DNA replication protein DnaC
DNA replication protein DnaC {ECO:0000313|EMBL:CDS93299.1}; Helicase loader ATPase, dnaI {ECO:0000313|EMBL:CEK00374.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostrept
NECEvent2014_2_8_scaffold_309_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7115..7399)
DNA (285bp) protein (95aa)
DnaD domain protein n=3 Tax=Clostridium difficile RepID=T3FZY5_CLODI
hypothetical protein
DNA replication protein DnaD/DnaB {ECO:0000313|EMBL:CCL31892.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostri
Displaying 11 items

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