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NECEvent2014_2_8_scaffold_525

Alias: 172_008_scaffold_525

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_8_scaffold_525_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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89..394
DNA (306bp) protein (102aa)
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component n=191 Tax=Clostridium difficile RepID=T3G0A6_CLODC
PTS system lactose/cellobiose-family transporter subunit IIA
PTS system, lactose/cellobiose-family IIA component {ECO:0000313|EMBL:CCK92242.1}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" so
NECEvent2014_2_8_scaffold_525_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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491..826
DNA (336bp) protein (112aa)
PTS system, IIb component n=219 Tax=Clostridium difficile RepID=C9XS33_CLODC
PTS system transporter subunit IIB
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFH08893.1}; TaxID=525259 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" sou
NECEvent2014_2_8_scaffold_525_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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858..2180
DNA (1323bp) protein (441aa)
PTS system, lactose/cellobiose IIC component family protein n=12 Tax=Clostridium difficile RepID=T3G2X8_CLODC rbh
PTS system, lactose/cellobiose-family IICcomponent
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium diffici
NECEvent2014_2_8_scaffold_525_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2190..3260
DNA (1071bp) protein (357aa)
putative peptidase, M24 family (EC:3.4.-.-)
Peptidase {ECO:0000313|EMBL:CKG73490.1}; EC=3.4.-.- {ECO:0000313|EMBL:CKG73490.1};; Putative peptidase, M24 family {ECO:0000313|EMBL:CEK00153.1}; EC=3.4.-.- {ECO:0000313|EMBL:CEK00153.1};; TaxID=1496
Metallopeptidase M24 family protein n=6 Tax=Clostridium difficile RepID=T3G593_CLODC rbh
NECEvent2014_2_8_scaffold_525_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3265..4452
DNA (1188bp) protein (396aa)
putative pyridoxal phosphate-dependenttransferase (PLP-dependent transferase) (EC:2.6.1.-)
Aminotransferas {ECO:0000313|EMBL:CKG73524.1}; EC=4.4.1.8 {ECO:0000313|EMBL:CKG73524.1};; Putative pyridoxal phosphate-dependent transferase (PLP-dependent transferase) {ECO:0000313|EMBL:CDS89751.1};
C-S lyase family protein n=162 Tax=Clostridium difficile RepID=T3G498_CLODC rbh
Displaying 5 items

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