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NECEvent2014_2_8_scaffold_417_6

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 3591..4238

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase factor sigma-70 {ECO:0000313|EMBL:CCK89609.1}; EC=2.7.7.6 {ECO:0000313|EMBL:CCK89609.1};; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 419
  • Evalue 2.70e-114
RNA polymerase sigma-H factor n=219 Tax=Clostridium difficile RepID=C9XIH3_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 419
  • Evalue 1.90e-114
  • rbh
sigH; RNA polymerase factor sigma-70 similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 215.0
  • Bit_score: 419
  • Evalue 5.30e-115

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 648
ATGTTGGTAGCAAAAGAAAAAAGTTATGAGTTAGTGGACAATTGTCAGCAGGATGAGTATAACATTGTATTAAGAGCAAGTGAAGGGGATAAAATAGCACTAGAGTACATTATTACTAAATACAGAAATTTTGTAAAGGCAAAAGCAAAGTCATATTTTTTAATTGGAGCAGATAAAGAAGATATAATACAAGAAGGAATGATAGGCCTTTATAAGGCAGTTAGAGATTTTGATGGAAGTAAGACCAATTCATTTAAATGTTTTGCGGAGATATGTATAACAAGACAAATAATAACTGCTATAAAAACTGCAACAAGACAAAAACATATACCTTTAAATTCATATGTTTCTTTGAATAAACCAATATATGATGAAGAGTCAGACAGAACACTTTTAGATATTATAGCTACAAGTATAGTAACAGATCCAGAAGAGCTTATAATTAGTAAAGAAGAGTTGAAAAATATAGAATCAAAAATGAACGAATTGTTAAGTGACTTGGAATTAGAAGTACTAGAATTATATTTAAATGGAAAGTCATACCAGTTTATAGCGGACAAGCTTAAAAGAGATGTAAAGTCAATAGATAACGCTTTACAAAGGGTTAAGAGAAAATTAGAAAAACATCTTGAAAACAGAAATGATTAA
PROTEIN sequence
Length: 216
MLVAKEKSYELVDNCQQDEYNIVLRASEGDKIALEYIITKYRNFVKAKAKSYFLIGADKEDIIQEGMIGLYKAVRDFDGSKTNSFKCFAEICITRQIITAIKTATRQKHIPLNSYVSLNKPIYDEESDRTLLDIIATSIVTDPEELIISKEELKNIESKMNELLSDLELEVLELYLNGKSYQFIADKLKRDVKSIDNALQRVKRKLEKHLENRND*