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NECEvent2014_2_8_scaffold_456_5

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(4505..5116)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein n=75 Tax=Clostridium difficile RepID=T3IEE5_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 405
  • Evalue 2.70e-110
  • rbh
Transcriptional regulator, RpiR family similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 405
  • Evalue 7.50e-111
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCL24133.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 203.0
  • Bit_score: 405
  • Evalue 3.70e-110

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 612
TCTAGAGCTACTTTATTAAGGCTTTGTAGAAAAATTGGATTAGATTCATTCTCTGATTTAAAGTATTTACTTAAAAATAATCAACTAGAATTTGTTAATAATGATAATAATTTTCATGATGTTTGCGAGAATTATCGACTATTAATGAATGAATTACAAAAAATATCATTTCAAGATATTTGTAAAATAATATATGATGCAGAAACAATTTATATTTATGGGACAGGTAATGAACAGAAAAGTTTAGCTCAAGAAATAAAGAGAATATTTCTTTCAGTAGGTAAATGTGTTATTGACTTATTTGATATAGGTGAAATTGAATTTATGAGAGAATCATTTCAAAAAAATGATTTATTTATTATCATTTCTTTGTCTGGAGAAACAAAAGCAGGAATTGAAATTGCAAAATTTATCAACAATCATATACATACGATTTCTTTAACTAGGCTTGATAATAATACAATTGCAACACTTTGTGAGTATAATCTGTATGTTGAAACGCAAAAACTTGATACATTACAAGCTATATCTTATGAAGTCGTAGGAGCATTTTATGCTCTATTAGATTTGCTTCATATGAATTACATAGAGTATAGAAGGAGAAAAGAATGA
PROTEIN sequence
Length: 204
SRATLLRLCRKIGLDSFSDLKYLLKNNQLEFVNNDNNFHDVCENYRLLMNELQKISFQDICKIIYDAETIYIYGTGNEQKSLAQEIKRIFLSVGKCVIDLFDIGEIEFMRESFQKNDLFIIISLSGETKAGIEIAKFINNHIHTISLTRLDNNTIATLCEYNLYVETQKLDTLQAISYEVVGAFYALLDLLHMNYIEYRRRKE*