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NECEvent2014_2_8_scaffold_456

Alias: 172_008_scaffold_456

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_8_scaffold_456_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1141)
DNA (1140bp) protein (380aa)
PTS system sucrose-specific transporter subunit IIABC (EC:2.7.1.69)
PTS system, sucrose-specific IIABC component {ECO:0000313|EMBL:CCL24137.1}; EC=2.7.1.69 {ECO:0000313|EMBL:CCL24137.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostr
PTS system, sucrose-specific IIABC component n=32 Tax=Clostridium difficile RepID=T2VYQ7_CLODI rbh
NECEvent2014_2_8_scaffold_456_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1146..2810)
DNA (1665bp) protein (555aa)
oligo-1,6-glucosidase (EC:3.2.1.10)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium
Alpha amylase, catalytic domain protein n=29 Tax=Clostridium difficile RepID=T3IJB3_CLODC rbh
NECEvent2014_2_8_scaffold_456_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2824..3645)
DNA (822bp) protein (274aa)
Cof-like hydrolase n=2 Tax=Clostridium difficile RepID=G6BR55_CLODI rbh
hydrolase
Putative hydrolase {ECO:0000313|EMBL:CBE02175.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (
NECEvent2014_2_8_scaffold_456_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3744..4508)
DNA (765bp) protein (255aa)
Helix-turn-helix domain, rpiR family protein n=125 Tax=Clostridium difficile RepID=T3ID23_CLODC rbh
Transcriptional regulator, RpiR family
RpiR family transcriptional regulator {ECO:0000313|EMBL:CKH70232.1}; Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CEJ96992.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_2_8_scaffold_456_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4505..5116)
DNA (612bp) protein (204aa)
Helix-turn-helix domain, rpiR family protein n=75 Tax=Clostridium difficile RepID=T3IEE5_CLODC rbh
Transcriptional regulator, RpiR family
Transcriptional regulator, RpiR family {ECO:0000313|EMBL:CCL24133.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptocl
Displaying 5 items

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