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NECEvent2014_2_8_scaffold_962_2

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(670..1023)

Top 3 Functional Annotations

Value Algorithm Source
DNA binding domain of tn916 integrase n=13 Tax=Clostridium difficile RepID=G6BPV4_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 240
  • Evalue 6.60e-61
Integrase {ECO:0000313|EMBL:CKH25536.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 117.0
  • Bit_score: 240
  • Evalue 9.20e-61
Site-specific recombinase XerD similarity KEGG
DB: KEGG
  • Identity: 74.8
  • Coverage: 115.0
  • Bit_score: 177
  • Evalue 1.90e-42

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 354
ATGTCAACTGAAAAAAGACGAGATAATAAAGATAGAATTTTAAGAACTGGAGAGAGCCAGAGAAAAGATGGAAGATACGCATATAAGTATGTATATTCATTTGGTAAAGCACAATTTGTTTACTCTTGGAAACTTGTACCTACTGATAAACCCCCAAAGGGAAAACGTGATGATATATCATTAAGGGATAAGGAAAAAGCAATACAAAATGACCTTGATGATAGCATTGACACTATTGGTAAGAAAATGACAGTTTGTCAGTTATACGCTAAAAAGAATGTACTAAGAAAGAATATCCGACTTAACACTAAAAAAGGACGCCATTATCTTATGAAGATTCTTAACAAGGAGTGA
PROTEIN sequence
Length: 118
MSTEKRRDNKDRILRTGESQRKDGRYAYKYVYSFGKAQFVYSWKLVPTDKPPKGKRDDISLRDKEKAIQNDLDDSIDTIGKKMTVCQLYAKKNVLRKNIRLNTKKGRHYLMKILNKE*