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NECEvent2014_2_8_scaffold_962

Alias: 172_008_scaffold_962

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Displaying 5 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_2_8_scaffold_962_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..598)
DNA (597bp) protein (199aa)
sat; streptogramin A acetyltransferase (EC:2.3.1.-)
Streptogramin A acetyltransferase (Virginiamycin acetyltransferase D) (Vat(D)) {ECO:0000313|EMBL:CAJ69111.1}; EC=2.3.1.- {ECO:0000313|EMBL:CAJ69111.1};; TaxID=272563 species="Bacteria; Firmicutes; Clo
Streptogramin A acetyltransferase (Virginiamycin acetyltransferase D) (Vat(D)) n=176 Tax=Clostridium difficile RepID=Q186B4_CLOD6 rbh
NECEvent2014_2_8_scaffold_962_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(670..1023)
DNA (354bp) protein (118aa)
DNA binding domain of tn916 integrase n=13 Tax=Clostridium difficile RepID=G6BPV4_CLODI
Integrase {ECO:0000313|EMBL:CKH25536.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium
Site-specific recombinase XerD
NECEvent2014_2_8_scaffold_962_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1694..1924)
DNA (231bp) protein (77aa)
Uncharacterized protein n=81 Tax=Clostridium difficile RepID=G6BPV5_CLODI
hypothetical protein
Helix-turn-helix domain {ECO:0000313|EMBL:CKH25513.1}; Putative extrachromosomal origin protein {ECO:0000313|EMBL:CDS85821.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
NECEvent2014_2_8_scaffold_962_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1926..2420)
DNA (495bp) protein (165aa)
RNA polymerase sigma factor, sigma-70 family protein n=6 Tax=Clostridium difficile RepID=T2TYI1_CLODI rbh
putative extrachromosomal origin protein
Putative extrachromosomal origin protein {ECO:0000313|EMBL:CAJ69108.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoc
NECEvent2014_2_8_scaffold_962_5
unknown

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comp(2666..2779)
DNA (114bp) protein (38aa)

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Displaying 5 items

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