ggKbase home page

NECEvent2014_2_8_scaffold_1340_1

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: comp(2..847)

Top 3 Functional Annotations

Value Algorithm Source
AP endonuclease, family 2 n=169 Tax=Clostridium difficile RepID=G6C035_CLODI similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 282.0
  • Bit_score: 567
  • Evalue 5.60e-159
  • rbh
sugar phosphate epimerase/isomerase similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 282.0
  • Bit_score: 567
  • Evalue 1.60e-159
Xylose isomerase-like TIM barrel family protein {ECO:0000313|EMBL:EQG75833.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 282.0
  • Bit_score: 567
  • Evalue 7.90e-159

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 846
ATGAATAATCAAAAAAATCTTAATATTCCAATTACAATTAGTTCTTATACATTGGGAACAGAAGTTTCATTCCGTGATAGAGTTCGTATTGCAAAAGAAGCTGGGTTTGATGGTATTGGATTGCGTGCTGAAAATTATATTGATGCAAAAAATGCAGGTGTTACAGATGAAGAAATGATTGCAATTCTTAATGAATATGATATGAAAGTTACAGAAGTAGAATATATAACTCAATGGGGAAGAGAAGAAGATAGAACGGAAGCTCAAAGAGAAAAAGAGCAAAATGTTTATCATATGGCTCACTTATTTAATGTTAAACATATAAATTGTGGATTATTAGAGATGATACCAGAAGAACAAATTATAACTGCATTGGGAGAATTATGTGACAGAGCAGGTGAACTTATTATAGGTCTTGAGTTTATGCCATATAGTGGTGTACCAGATTTGGCTACTGCATGGCGTGTTGTGAAAGGATGTAATCGTGAAAATGCAATGCTTATATTAGATACTTGGCACTGGGCTAGAGCAAAGCAGACAGCAGAGGACCTTGCACCTGTTCCAGCAGATAAGATAGTATCAATTCAAGTGTGTGATGTTTTAGAAACTCCTTATGAAAAACTTAGGGATGAATCACTACATGACCGTTTGGCTCCAGGTGAAGGATATGGAAACACAGAGGAATTTGTGAAAATAATAAAAGAACACAATATATCACCAAGAGTCATAGGGGCAGAAGTAATATCTGATTCTCTAATATCTAAAGGGTTATCCACTGCTGCTGAAACTGTATTTAATGCAACTAAAAAAGTTTTGGATAAAGCATGGTCTGAAGTATCTCCAAAA
PROTEIN sequence
Length: 282
MNNQKNLNIPITISSYTLGTEVSFRDRVRIAKEAGFDGIGLRAENYIDAKNAGVTDEEMIAILNEYDMKVTEVEYITQWGREEDRTEAQREKEQNVYHMAHLFNVKHINCGLLEMIPEEQIITALGELCDRAGELIIGLEFMPYSGVPDLATAWRVVKGCNRENAMLILDTWHWARAKQTAEDLAPVPADKIVSIQVCDVLETPYEKLRDESLHDRLAPGEGYGNTEEFVKIIKEHNISPRVIGAEVISDSLISKGLSTAAETVFNATKKVLDKAWSEVSPK