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NECEvent2014_2_8_scaffold_1340_2

Organism: NECEvent2014_2_8_Peptoclostridium_difficile_29_5

near complete RP 45 / 55 MC: 1 BSCG 47 / 51 ASCG 12 / 38 MC: 3
Location: 1260..2141

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein n=3 Tax=Clostridium difficile RepID=T3GAB0_CLODC similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 293.0
  • Bit_score: 580
  • Evalue 8.70e-163
  • rbh
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 99.3
  • Coverage: 293.0
  • Bit_score: 577
  • Evalue 1.60e-162
Transcriptional regulator, LysR family {ECO:0000313|EMBL:CAJ69597.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 293.0
  • Bit_score: 577
  • Evalue 7.90e-162

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Taxonomy

Peptoclostridium difficile → Peptoclostridium → Clostridiales → Clostridia → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 882
TTGAATTTATATCACTTACGCTATTTTGTTACATTGGCACATTTAGAACACTATACAAAAGCGGCAGAAAATTTATCTATAACACAACCAAGCTTAAGTCATGCTATTTCTTTACTAGAAAATGAACTTGGGGTGGCTCTATTTGAAAAAGAAGGTAGAAATATAGTCCTTACTAAGTATGGAAAAATATTTTTAAAAGATGTGGAAAAATCATTAGAAATTTTAGATTCAAGTGTAAAATCATTAAAAATAACTGGTACTGGTGAAGGACAAATAGACTTAGCTTTTCTTAGAACACTTGGTACTGATTTTATCCCAGACATAGTGCATAAATTTTTAAAATCTAATCCTGCTAAATCAATAGATTTTAAATTTCATACTGGTGTAACTACTGACATTATTCAAGGTCTTAAAGAAAGAAAATATGATATTGCATTTTGTTCGAAACTTGAAAAAGAAAAGGGAATTGAATTTATACCTGTTGCCAAACAAGATTTAGTACTAATTGTACCATATAGTCATCCACTAGCCGCAAAGGATACTATAGATTTAAAAGAAACCATACCTTATCCTCAAATAGTATTTAATCAGAGAAGCGGTCTTAGATATATAATTGATGATATGTTTAAAAAAATAAATCAACAGCCTAATATAGTCTATGAAGTAGAGAAAGACCAAGTAATTGCTGGATTAGTTGCAAAAAATTTCGGAATTGCTGTAGTCCCAAATATGAATATGCTTAGCTTTACAAAAGTAAAAGTAATTCAGATTATTCACCCAAGTTGGGAAAGAAACTTTTACTTAGCATTTATAAAAGATAGATATTTGCCTCCTGCAATTAAAAACTTTAAAAACTTTGTCATTAAAAACGCTCAATTATAA
PROTEIN sequence
Length: 294
LNLYHLRYFVTLAHLEHYTKAAENLSITQPSLSHAISLLENELGVALFEKEGRNIVLTKYGKIFLKDVEKSLEILDSSVKSLKITGTGEGQIDLAFLRTLGTDFIPDIVHKFLKSNPAKSIDFKFHTGVTTDIIQGLKERKYDIAFCSKLEKEKGIEFIPVAKQDLVLIVPYSHPLAAKDTIDLKETIPYPQIVFNQRSGLRYIIDDMFKKINQQPNIVYEVEKDQVIAGLVAKNFGIAVVPNMNMLSFTKVKVIQIIHPSWERNFYLAFIKDRYLPPAIKNFKNFVIKNAQL*