ggKbase home page

NECEvent2014_3_1_scaffold_2

Alias: 173_005_scaffold_2

Search features with annotation key words

Displaying items 1-30 of 784 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_2_1
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(662..871)
DNA (210bp) protein (70aa)
Molybdate-binding domain of ModE n=5 Tax=Veillonella RepID=T0T6E4_9FIRM
Putative molybdenum transport protein ModG {ECO:0000313|EMBL:EFG25166.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonell
TOBE domain-containing protein
NECEvent2014_3_1_scaffold_2_trna_13
unknown

Not on your lists

comp(963..1033)
DNA (71bp)
transferRNA
NECEvent2014_3_1_scaffold_2_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1172..2503
DNA (1332bp) protein (444aa)
Uncharacterized protein n=5 Tax=Veillonella RepID=T0T6F6_9FIRM rbh
PepSY-associated TM helix superfamily {ECO:0000313|EMBL:EFG23371.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
PepSY-associated TM helix domain-containing protein
NECEvent2014_3_1_scaffold_2_3
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2577..3758
DNA (1182bp) protein (394aa)
UPI0003D68A49 related cluster n=1 Tax=unknown RepID=UPI0003D68A49 rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadale
Na+/H+ antiporter NhaA
NECEvent2014_3_1_scaffold_2_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3794..4966
DNA (1173bp) protein (391aa)
UPI0003D605BE related cluster n=1 Tax=unknown RepID=UPI0003D605BE rbh
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadal
Na+/H+ antiporter NhaA
NECEvent2014_3_1_scaffold_2_5
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5229..5837
DNA (609bp) protein (203aa)
UPI0003D63AF1 related cluster n=1 Tax=unknown RepID=UPI0003D63AF1 rbh
3D protein {ECO:0000313|EMBL:ETJ02338.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
NECEvent2014_3_1_scaffold_2_6
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6064..6882
DNA (819bp) protein (273aa)
Pur operon repressor PurR n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXR0_9FIRM rbh
Pur operon repressor PurR {ECO:0000313|EMBL:EGL77833.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068
purine operon repressor, PurR
NECEvent2014_3_1_scaffold_2_7
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7014..8387
DNA (1374bp) protein (458aa)
UPI0003D6865C related cluster n=1 Tax=unknown RepID=UPI0003D6865C rbh
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
UDP-N-acetylglucosamine pyrophosphorylase
NECEvent2014_3_1_scaffold_2_8
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8515..9468
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase n=5 Tax=Veillonella RepID=D1BLN4_VEIPT rbh
ribose-phosphate pyrophosphokinase
NECEvent2014_3_1_scaffold_2_9
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9479..10057
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase n=4 Tax=Veillonella RepID=T0SZH0_9FIRM rbh
peptidyl-tRNA hydrolase
NECEvent2014_3_1_scaffold_2_10
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10115..11596
DNA (1482bp) protein (494aa)
Arginine decarboxylase Lysine decarboxylase Ornithine decarboxylase n=3 Tax=Veillonella RepID=T0T6F1_9FIRM rbh
Arginine 2-monooxygenase {ECO:0000313|EMBL:EFG23379.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
Orn/Lys/Arg decarboxylase major region
NECEvent2014_3_1_scaffold_2_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11599..12285
DNA (687bp) protein (229aa)
Thymidylate kinase {ECO:0000313|EMBL:EQC66602.1}; EC=2.7.4.9 {ECO:0000313|EMBL:EQC66602.1};; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;
Thymidylate kinase n=2 Tax=Veillonella parvula RepID=T0T6G4_9FIRM rbh
thymidylate kinase
NECEvent2014_3_1_scaffold_2_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12361..13401
DNA (1041bp) protein (347aa)
DNA polymerase III, delta' subunit domain protein n=2 Tax=Veillonella parvula RepID=D1YMJ7_9FIRM rbh
Conserved domain protein {ECO:0000313|EMBL:EGL78061.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-
DNA polymerase III subunits gamma/tau
NECEvent2014_3_1_scaffold_2_13
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13402..14247
DNA (846bp) protein (282aa)
PSP1 C-terminal domain protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXR7_9FIRM rbh
PSP1 C-terminal domain protein {ECO:0000313|EMBL:EGL78169.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula AC
PSP1 domain-containing protein
NECEvent2014_3_1_scaffold_2_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14240..14965
DNA (726bp) protein (242aa)
tRNA (Adenine37-N(6)-)-methyltransferase TrmN6 n=3 Tax=Veillonella parvula RepID=T0SZH5_9FIRM rbh
Methyltransferase small domain protein {ECO:0000313|EMBL:EGL78201.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella pa
methyltransferase small
NECEvent2014_3_1_scaffold_2_15
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14955..15803
DNA (849bp) protein (283aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I n=3 Tax=Veillonella parvula RepID=T0T6F4_9FIRM rbh
uroporphyrin-III C/tetrapyrrole methyltransferase
NECEvent2014_3_1_scaffold_2_16
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


15838..17784
DNA (1947bp) protein (649aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KGY8_9FIRM rbh
methionyl-tRNA synthetase
NECEvent2014_3_1_scaffold_2_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17784..18554
DNA (771bp) protein (257aa)
Hydrolase, TatD family n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXS1_9FIRM rbh
Hydrolase, TatD family {ECO:0000313|EMBL:EGL77853.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-V-
TatD family hydrolase
NECEvent2014_3_1_scaffold_2_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18769..20316
DNA (1548bp) protein (516aa)
Exopolyphosphatase n=3 Tax=Veillonella parvula RepID=T0U9Q7_9FIRM rbh
Putative exopolyphosphatase {ECO:0000313|EMBL:EFB86622.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC
Ppx/GppA phosphatase
NECEvent2014_3_1_scaffold_2_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

20316..21881
DNA (1566bp) protein (522aa)
Exopolyphosphatase-like protein n=2 Tax=Veillonella parvula RepID=D1BLP5_VEIPT rbh
Exopolyphosphatase-like protein {ECO:0000313|EMBL:ACZ24302.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula (
Exopolyphosphatase-like protein
NECEvent2014_3_1_scaffold_2_20
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21871..23988
DNA (2118bp) protein (706aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=2 Tax=Veillonella RepID=D6KGZ2_9FIRM rbh
polyphosphate kinase
NECEvent2014_3_1_scaffold_2_21
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

24414..25391
DNA (978bp) protein (326aa)
3D domain protein n=4 Tax=Veillonella RepID=D1YMK6_9FIRM rbh
3D protein {ECO:0000313|EMBL:ETJ02354.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;"
hypothetical protein
NECEvent2014_3_1_scaffold_2_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25514..26452)
DNA (939bp) protein (313aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=3 Tax=Veillonella RepID=D6KGZ4_9FIRM rbh
methionine-R-sulfoxide reductase
NECEvent2014_3_1_scaffold_2_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26453..27574)
DNA (1122bp) protein (374aa)
Methionine synthase vitamin-B12 independent n=2 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLP9_VEIPT rbh
vitamin-B12 independent methionine synthase
Methionine synthase vitamin-B12 independent {ECO:0000313|EMBL:ACZ24306.1}; TaxID=479436 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
NECEvent2014_3_1_scaffold_2_24
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(27828..28766)
DNA (939bp) protein (313aa)
Transcriptional regulator, MarR family n=4 Tax=Veillonella RepID=D1BLQ0_VEIPT rbh
MarR family transcriptional regulator
Transcriptional regulator CpsY {ECO:0000313|EMBL:EFG23394.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44
NECEvent2014_3_1_scaffold_2_25
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

28837..29400
DNA (564bp) protein (188aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 n=3 Tax=Veillonella RepID=D1BLQ1_VEIPT rbh
primase/topoisomerase-like protein
NECEvent2014_3_1_scaffold_2_26
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


29414..30268
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T6H7_9FIRM rbh
dimethyladenosine transferase
NECEvent2014_3_1_scaffold_2_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30359..31606)
DNA (1248bp) protein (416aa)
Putative sodium/glutamate symporter n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5KXT1_9FIRM rbh
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EGL78030.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvu
sodium/glutamate symporter
NECEvent2014_3_1_scaffold_2_28
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(32052..33647)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 n=2 Tax=Veillonella sp. 3_1_44 RepID=D6KH00_9FIRM rbh
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=457416 species="Bacteria; Firmicutes; Negativicute
peptide chain release factor 3
NECEvent2014_3_1_scaffold_2_29
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

33827..36148
DNA (2322bp) protein (774aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=479436 species="Bacteria; Firmicute
DNA topoisomerase n=1 Tax=Veillonella parvula (strain ATCC 10790 / DSM 2008 / JCM 12972 / Te3) RepID=D1BLQ5_VEIPT rbh
DNA topoisomerase III
Displaying items 1-30 of 784 in total

View Taxonomy