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NECEvent2014_3_1_scaffold_329

Alias: 173_005_scaffold_329

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_329_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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49..1179
DNA (1131bp) protein (377aa)
Rod shape-determining protein RodA n=3 Tax=Clostridium butyricum RepID=B1R1A0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96871.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
stage V sporulation protein E
NECEvent2014_3_1_scaffold_329_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1310..1789
DNA (480bp) protein (160aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1R1A1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD14484.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
NECEvent2014_3_1_scaffold_329_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1934..2794
DNA (861bp) protein (287aa)
Sterol-regulatory element binding protein n=4 Tax=Clostridium butyricum RepID=B1R1A2_CLOBU rbh
TsaB protein, required for threonylcarbamoyladenosine (T(6)A) formation in tRNA {ECO:0000313|EMBL:KJZ96878.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; C
peptidase M50
NECEvent2014_3_1_scaffold_329_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2930..4969
DNA (2040bp) protein (680aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AG96_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ31147.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
S-layer domain-containing protein
NECEvent2014_3_1_scaffold_329_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5193..7046
DNA (1854bp) protein (618aa)
Radical SAM domain protein n=4 Tax=Clostridium butyricum RepID=B1R1A4_CLOBU rbh
Fe-S oxidoreductase {ECO:0000313|EMBL:KJZ91442.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
radical SAM domain-containing methylthiotransferase
NECEvent2014_3_1_scaffold_329_6
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7030..7731
DNA (702bp) protein (234aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7G3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96905.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_3_1_scaffold_329_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7871..9319
DNA (1449bp) protein (483aa)
rng; ribonuclease G (EC:3.1.26.-)
Ribonuclease, Rne/Rng family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHU1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84438.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
NECEvent2014_3_1_scaffold_329_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9465..9776
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=4 Tax=Clostridium butyricum RepID=B1R1A7_CLOBU
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
rplU; 50S ribosomal protein L21
NECEvent2014_3_1_scaffold_329_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9781..10167
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K324_CLOBU
Ribosomal protein {ECO:0000313|EMBL:KJZ91459.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
hypothetical protein
NECEvent2014_3_1_scaffold_329_10

Not on your lists


10172..10471
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=4 Tax=Clostridium butyricum RepID=B1R1A9_CLOBU
50S ribosomal protein L27 {ECO:0000313|EMBL:ETJ16735.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
rpmA; 50S ribosomal protein L27
NECEvent2014_3_1_scaffold_329_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10780..12069
DNA (1290bp) protein (430aa)
GTPase Obg n=4 Tax=Clostridium butyricum RepID=B1R1B0_CLOBU rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostrid
obg; GTPase Obg
NECEvent2014_3_1_scaffold_329_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12231..12533
DNA (303bp) protein (101aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1R1B1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96898.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
putative RNA-binding protein, YhbY family
NECEvent2014_3_1_scaffold_329_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12700..13311
DNA (612bp) protein (204aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244};
nadD; nicotinate-nucleotide adenylyltransferase NadD (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=3 Tax=Clostridium butyricum RepID=B1R1B2_CLOBU rbh
NECEvent2014_3_1_scaffold_329_14
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13337..13900
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K319_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96789.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
putative HD superfamily hydrolase of NAD metabolism
NECEvent2014_3_1_scaffold_329_15
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14183..15457
DNA (1275bp) protein (425aa)
Membrane-bound protein LytR n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KB86_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ96873.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
cell envelope-related transcriptional attenuator
NECEvent2014_3_1_scaffold_329_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15484..16389
DNA (906bp) protein (302aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
yjbO; RNA pseudouridine synthase YjbO (EC:5.4.99.-)
Ribosomal large subunit pseudouridine synthase, RluA family n=3 Tax=Clostridium butyricum RepID=B1R1B5_CLOBU rbh
NECEvent2014_3_1_scaffold_329_17
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16496..17737)
DNA (1242bp) protein (414aa)
Serine-type D-Ala-D-Ala carboxypeptidase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHS5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ84406.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Serine-type D-Ala-D-Ala carboxypeptidase
NECEvent2014_3_1_scaffold_329_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17905..18579
DNA (675bp) protein (225aa)
ComEA protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A3T5_CLOBU rbh
ComEA protein {ECO:0000313|EMBL:ENZ31133.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
helix-hairpin-helix repeat-containing competence protein ComEA
NECEvent2014_3_1_scaffold_329_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18969..19094
DNA (126bp) protein (42aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=R0AG76_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ96788.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Displaying 19 items

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