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NECEvent2014_3_1_scaffold_347

Alias: 173_005_scaffold_347

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Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_347_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..487
DNA (486bp) protein (162aa)
Alpha amylase, catalytic region n=2 Tax=Clostridium butyricum RepID=M8JGN9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33639.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
glycosidase
NECEvent2014_3_1_scaffold_347_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

565..2538
DNA (1974bp) protein (658aa)
Pullulanase, type I {ECO:0000313|EMBL:EEP54290.1}; EC=3.2.1.41 {ECO:0000313|EMBL:EEP54290.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
pulA; pullulanase PulA (EC:3.2.1.41)
Pullulanase, type I n=3 Tax=Clostridium butyricum RepID=C4IJP8_CLOBU rbh
NECEvent2014_3_1_scaffold_347_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2565..3329
DNA (765bp) protein (255aa)
UTP--hexose-1-phosphate uridylyltransferase n=2 Tax=Clostridium butyricum RepID=M8KBN6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33637.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_1_scaffold_347_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3582..4769
DNA (1188bp) protein (396aa)
Methyltransferase n=4 Tax=Clostridium butyricum RepID=B1QZM3_CLOBU rbh
LSU m5C1962 methyltransferase RlmI {ECO:0000313|EMBL:KJZ88986.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
rlmI; rRNA (guanine-N(2)-)-methyltransferase RlmI
NECEvent2014_3_1_scaffold_347_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4852..6018)
DNA (1167bp) protein (389aa)
Alanine racemase {ECO:0000256|HAMAP-Rule:MF_01201}; EC=5.1.1.1 {ECO:0000256|HAMAP-Rule:MF_01201};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
alr2; alanine racemase Alr (EC:5.1.1.1)
Alanine racemase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI80_CLOBU rbh
NECEvent2014_3_1_scaffold_347_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6148..7611)
DNA (1464bp) protein (488aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ALJ4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33634.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
transcriptional regulator, GntR family with aminotransferase domain containing protein
NECEvent2014_3_1_scaffold_347_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7771..8325
DNA (555bp) protein (185aa)
SNARE protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3F0_CLOBU rbh
Putative membrane protein {ECO:0000313|EMBL:KJZ88984.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
SNARE associated Golgi family protein
NECEvent2014_3_1_scaffold_347_8
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8518..10293
DNA (1776bp) protein (592aa)
rnjA3; ribonuclease J 1 (EC:3.1.-.-)
RNA-metabolising metallo-beta-lactamase family protein n=2 Tax=Clostridium butyricum RepID=B1QZL9_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89101.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_3_1_scaffold_347_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10374..12521)
DNA (2148bp) protein (716aa)
Ferrous iron transport protein B n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J7R7_CLOBU rbh
Ferrous iron transport protein B {ECO:0000313|EMBL:KJZ89091.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;
ferrous iron transport protein B
NECEvent2014_3_1_scaffold_347_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12548..12802)
DNA (255bp) protein (85aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QZL7_CLOBU
Ferrous iron transporter A {ECO:0000313|EMBL:ENZ33630.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_1_scaffold_347_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12941..13417
DNA (477bp) protein (159aa)
Iron dependent repressor n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JGM9_CLOBU rbh
Iron-dependent transcriptional repressor {ECO:0000313|EMBL:KJZ89006.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. I
putative iron-dependent repressor
NECEvent2014_3_1_scaffold_347_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13637..14131
DNA (495bp) protein (165aa)
RNA polymerase, sigma-24 subunit, ECF subfamily n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K3E5_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ94873.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ECF subfamily RNA polymerase sigma-24 factor
NECEvent2014_3_1_scaffold_347_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14115..15155
DNA (1041bp) protein (347aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8KBM3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88978.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
spore germination protein IA
NECEvent2014_3_1_scaffold_347_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15389..16780
DNA (1392bp) protein (464aa)
ErfK/YbiS/YcfS/YnhG family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JI68_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ88968.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_1_scaffold_347_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17018..17440
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1R5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33625.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_1_scaffold_347_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17562..17804)
DNA (243bp) protein (81aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=B1QZL0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ89080.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
Displaying 16 items

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