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NECEvent2014_3_1_scaffold_427

Alias: 173_005_scaffold_427

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_427_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..511)
DNA (510bp) protein (170aa)
Putative membrane protein n=2 Tax=Clostridium butyricum RepID=B1QUJ8_CLOBU rbh
Putative membrane-spanning protein {ECO:0000313|EMBL:KJZ84318.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125
hypothetical protein
NECEvent2014_3_1_scaffold_427_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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664..1329
DNA (666bp) protein (222aa)
Cyclic nucleotide-binding protein n=2 Tax=Clostridium butyricum RepID=M8JD89_CLOBU rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:KJZ84380.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
CRP (cyclic AMP receptor protein) regulatory protein
NECEvent2014_3_1_scaffold_427_3
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1409..2221
DNA (813bp) protein (271aa)
Exonuclease, RNase T and DNA polymerase III n=2 Tax=Clostridium butyricum RepID=B1QUK0_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97533.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
exonuclease
NECEvent2014_3_1_scaffold_427_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2373..3881)
DNA (1509bp) protein (503aa)
UPF0371 protein CBDKU1_35280 n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K7Y7_CLOBU rbh
UPF0371 protein ClosIBUN125C_CONTIG63g03402 {ECO:0000256|HAMAP-Rule:MF_01567}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
hypothetical protein
NECEvent2014_3_1_scaffold_427_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4098..6386)
DNA (2289bp) protein (763aa)
Diguanylate cyclase/phosphodiesterase n=2 Tax=Clostridium butyricum RepID=B1QUK2_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97524.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PAS/PAC and GAF sensor-containing diguanylate cyclase/phosphodiesterase
NECEvent2014_3_1_scaffold_427_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6552..7475)
DNA (924bp) protein (308aa)
2-dehydropantoate 2-reductase {ECO:0000256|RuleBase:RU003776}; EC=1.1.1.169 {ECO:0000256|RuleBase:RU003776};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
2-dehydropantoate 2-reductase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JEK9_CLOBU rbh
2-dehydropantoate 2-reductase
NECEvent2014_3_1_scaffold_427_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7692..8573
DNA (882bp) protein (294aa)
Transcriptional regulator, LysR family n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JD84_CLOBU rbh
Cys regulon transcriptional activator CysB {ECO:0000313|EMBL:KJZ84373.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.
LysR family transcriptional regulator
NECEvent2014_3_1_scaffold_427_8
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8638..9429)
DNA (792bp) protein (264aa)
Tryptophan synthase alpha chain {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00031177}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00131, ECO:0000256|SAAS:SAAS00108586};; TaxID=1523156 species="
tryptophan synthase, alpha chain (EC:4.2.1.20)
Tryptophan synthase alpha chain n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JZW5_CLOBU rbh
NECEvent2014_3_1_scaffold_427_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9422..10609)
DNA (1188bp) protein (396aa)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
tryptophan synthase, beta chain (EC:4.2.1.20)
Tryptophan synthase beta chain n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YXD3_CLOBU rbh
NECEvent2014_3_1_scaffold_427_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10735..11676
DNA (942bp) protein (314aa)
UPI0003D63FB0 related cluster n=1 Tax=unknown RepID=UPI0003D63FB0 rbh
Deoxyribonucleoside regulator {ECO:0000313|EMBL:ETI87505.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1
transcriptional regulator with sigma factor-related N-terminal domain
NECEvent2014_3_1_scaffold_427_11
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11780..13297)
DNA (1518bp) protein (506aa)
UPI0003D5E9D5 related cluster n=1 Tax=unknown RepID=UPI0003D5E9D5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97150.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
dihydropyrimidine dehydrogenase
NECEvent2014_3_1_scaffold_427_12
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13397..14509)
DNA (1113bp) protein (371aa)
D-hydantoinase (EC:3.5.2.2)
UPI0003D66E6D related cluster n=1 Tax=unknown RepID=UPI0003D66E6D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ97151.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Displaying 12 items

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