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NECEvent2014_3_1_scaffold_428

Alias: 173_005_scaffold_428

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_428_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..746
DNA (744bp) protein (248aa)
UV DNA damage endonuclease {ECO:0000313|EMBL:KJZ82921.1}; EC=3.-.-.- {ECO:0000313|EMBL:KJZ82921.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
uvsE; UV DNA damage endonuclease UvsE (EC:3.-.-.-)
UV damage endonuclease UvdE n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8C7_CLOBU rbh
NECEvent2014_3_1_scaffold_428_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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882..1433
DNA (552bp) protein (184aa)
UPI0003D5A72D related cluster n=1 Tax=unknown RepID=UPI0003D5A72D rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ82931.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
cell wall binding repeat-containing protein
NECEvent2014_3_1_scaffold_428_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1615..2946
DNA (1332bp) protein (444aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIF8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ36123.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
FAD-dependent pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_3_1_scaffold_428_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3305..4219
DNA (915bp) protein (305aa)
glucokinase (EC:2.7.1.2)
ROK family protein n=2 Tax=Clostridium butyricum RepID=B1QSS8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ90320.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_1_scaffold_428_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4434..4904
DNA (471bp) protein (157aa)
Sugar phosphate aldolase n=2 Tax=Clostridium butyricum RepID=B1QSS9_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85208.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L-ribulose-5-phosphate 4-epimerase
NECEvent2014_3_1_scaffold_428_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5276..6847
DNA (1572bp) protein (524aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ydiF3; acetate CoA-transferase YdiF (EC:2.8.3.8)
Acetate CoA-transferase YdiF n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Q0_CLOBU rbh
NECEvent2014_3_1_scaffold_428_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6905..7777
DNA (873bp) protein (291aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:KJZ85206.1}; EC=3.4.17.13 {ECO:0000313|EMBL:KJZ85206.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
LD-carboxypeptidase family protein n=2 Tax=Clostridium butyricum RepID=B1QST1_CLOBU rbh
LD-carboxypeptidase family protein
NECEvent2014_3_1_scaffold_428_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7811..8098)
DNA (288bp) protein (96aa)
UPI0003D65165 related cluster n=1 Tax=unknown RepID=UPI0003D65165
YlxP-like protein {ECO:0000313|EMBL:KJZ85214.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_1_scaffold_428_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8686..11328
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AIG4_CLOBU rbh
valS; valyl-tRNA synthetase
NECEvent2014_3_1_scaffold_428_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11470..12330
DNA (861bp) protein (287aa)
Drug efflux protein n=2 Tax=Clostridium butyricum RepID=B1QST4_CLOBU rbh
Integral membrane protein TerC {ECO:0000313|EMBL:EEP53670.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
alx2; inner membrane protein Alx
NECEvent2014_3_1_scaffold_428_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12645..13952
DNA (1308bp) protein (436aa)
Dihydrofolate synthase/Folylpolyglutamate synthase {ECO:0000313|EMBL:KJZ92093.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KJZ92093.1};; EC=6.3.2.17 {ECO:0000313|EMBL:KJZ92093.1};; TaxID=1523155 species="Bacteri
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
FolC protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8Q5_CLOBU rbh
NECEvent2014_3_1_scaffold_428_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14003..14452
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z8E2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85205.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
HIRAN domain-containing protein
Displaying 12 items

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