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NECEvent2014_3_1_scaffold_541

Alias: 173_005_scaffold_541

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_541_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3..617
DNA (615bp) protein (205aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=M8JLP4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ89071.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_1_scaffold_541_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(784..1473)
DNA (690bp) protein (230aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
ribulose-phosphate 3-epimerase (EC:5.1.3.1)
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z1J8_CLOBU rbh
NECEvent2014_3_1_scaffold_541_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1475..2122)
DNA (648bp) protein (216aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
tal3; transaldolase Tal (EC:2.2.1.2)
Probable transaldolase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0X1_CLOBU rbh
NECEvent2014_3_1_scaffold_541_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2170..3096)
DNA (927bp) protein (309aa)
putative transketolase C-terminal section (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AN88_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33572.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_1_scaffold_541_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3116..3931)
DNA (816bp) protein (272aa)
transketolase (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AAY3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33573.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_1_scaffold_541_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3992..4855)
DNA (864bp) protein (288aa)
ulaE; L-ribulose-5-phosphate 3-epimerase UlaE (EC:5.1.3.22)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=R0ALC8_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33574.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_1_scaffold_541_7
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4938..5645)
DNA (708bp) protein (236aa)
araD; L-ribulose-5-phosphate 4-epimerase AraD (EC:5.1.3.4)
L-ribulose-5-phosphate 4-epimerase SgbE n=4 Tax=Clostridium butyricum RepID=B1QZG1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91958.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
NECEvent2014_3_1_scaffold_541_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5744..6772)
DNA (1029bp) protein (343aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0X6_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33576.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_3_1_scaffold_541_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6806..7099)
DNA (294bp) protein (98aa)
Ascorbate-specific phosphotransferase enzyme iib component n=4 Tax=Clostridium butyricum RepID=B1QZG3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33577.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative PTS system, L-ascorbate family, IIB component
NECEvent2014_3_1_scaffold_541_10
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7125..8582)
DNA (1458bp) protein (486aa)
Ascorbate-specific PTS system enzyme IIC n=2 Tax=Clostridium butyricum RepID=M8JMY1_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ91950.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
ulaA; ascorbate-specific permease IIC component UlaA
NECEvent2014_3_1_scaffold_541_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8611..9069)
DNA (459bp) protein (153aa)
PTS system IIA component, L-Asc family (EC:2.7.1.69)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0ALD3_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:ENZ33579.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_3_1_scaffold_541_12
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9199..10290)
DNA (1092bp) protein (364aa)
ulaG; putative L-ascorbate-6-phosphate lactonase UlaG (EC:3.1.1.-)
Zn-dependent hydrolase of the beta-lactamase fold family n=2 Tax=Clostridium butyricum RepID=M8K874_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ90189.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_3_1_scaffold_541_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10648..11427
DNA (780bp) protein (260aa)
Lactose phosphotransferase system repressor n=3 Tax=Clostridium butyricum RepID=B1QZG7_CLOBU rbh
Transcriptional repressor of the fructose operon, DeoR family {ECO:0000313|EMBL:KJZ89072.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
transcriptional regulator, DeoR family
NECEvent2014_3_1_scaffold_541_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11525..11701)
DNA (177bp) protein (59aa)
Transporter n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JCH2_CLOBU
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
sodium:neurotransmitter symporter family protein
Displaying 14 items

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