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NECEvent2014_3_1_scaffold_275

Alias: 173_005_scaffold_275

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Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_275_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..743
DNA (741bp) protein (247aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.3.1.98)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000255|HAMAP-Rule:MF_00037}; EC=1.3.1.98 {ECO:0000255|HAMAP-Rule:MF_00037};; UDP-N-acetylmuramate dehydrogenase {ECO:0000255|HAMAP-Rule:MF_00037}; T
UDP-N-acetylenolpyruvoylglucosamine reductase n=6 Tax=Staphylococcus epidermidis RepID=MURB_STAEQ rbh
NECEvent2014_3_1_scaffold_275_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

765..1079
DNA (315bp) protein (105aa)
Uncharacterized protein n=43 Tax=Staphylococcus epidermidis RepID=Q5HQZ2_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW53793.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_3_1_scaffold_275_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(1230..2273)
DNA (1044bp) protein (348aa)
Transferrin receptor n=42 Tax=Staphylococcus epidermidis RepID=Q5HQZ3_STAEQ rbh
transferrin receptor
Transferrin receptor {ECO:0000313|EMBL:AAW53792.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_3_1_scaffold_275_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2352..3131)
DNA (780bp) protein (260aa)
Iron compound ABC transporter, ATP-binding protein n=70 Tax=Staphylococcus epidermidis RepID=Q5HQZ4_STAEQ rbh
Iron compound ABC uptake transporter ATP-binding protein
Iron ABC transporter ATP-binding protein {ECO:0000313|EMBL:ESV19034.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_3_1_scaffold_275_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3128..4087)
DNA (960bp) protein (320aa)
Ferrichrome ABC transporter permease n=47 Tax=Staphylococcus epidermidis RepID=Q8CPZ9_STAES rbh
ferrichrome ABC transporter permease
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EFE58036.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococ
NECEvent2014_3_1_scaffold_275_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4071..5045)
DNA (975bp) protein (325aa)
Iron compound ABC transporter, permease protein n=36 Tax=Staphylococcus epidermidis RepID=Q5HQZ6_STAEQ rbh
Iron compound ABC uptake transporter permease protein
Iron compound ABC transporter, permease protein {ECO:0000313|EMBL:AAW53789.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (st
NECEvent2014_3_1_scaffold_275_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5061..5324)
DNA (264bp) protein (88aa)
Uncharacterized protein n=16 Tax=Staphylococcus epidermidis RepID=Q5HQZ7_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE58034.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_1_scaffold_275_8
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5299..6267)
DNA (969bp) protein (323aa)
Ribonucleotide reductase of class Ib (aerobic),beta subunit (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase 2, beta subunit n=61 Tax=Staphylococcus epidermidis RepID=Q5HQZ8_STAEQ rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ12871.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_3_1_scaffold_275_9
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(6386..8491)
DNA (2106bp) protein (702aa)
nrdE; ribonucleotide-diphosphate reductase subunit alpha (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;"
Ribonucleoside-diphosphate reductase n=47 Tax=Staphylococcus epidermidis RepID=Q5HQZ9_STAEQ rbh
NECEvent2014_3_1_scaffold_275_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8454..8852)
DNA (399bp) protein (133aa)
Protein NrdI n=76 Tax=Staphylococcus epidermidis RepID=NRDI_STAEQ
Ribonucleotide reduction protein NrdI
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_3_1_scaffold_275_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

9607..10482
DNA (876bp) protein (292aa)
Membrane protein, putative n=26 Tax=Staphylococcus epidermidis RepID=Q5HR01_STAEQ rbh
Integral membrane domain protein
Membrane protein, putative {ECO:0000313|EMBL:AAW53775.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP6
NECEvent2014_3_1_scaffold_275_12
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

10496..10996
DNA (501bp) protein (167aa)
NADPH-dependent 7-cyano-7-deazaguanine reductase {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00184002}; EC=1.7.1.13 {ECO:0000256|HAMAP-Rule:MF_00818, ECO:0000256|SAAS:SAAS00001352};; 7-cyan
NADPH-dependent 7-cyano-7-deazaguanine reductase n=49 Tax=Staphylococcus epidermidis RepID=QUEF_STAEQ rbh
7-cyano-7-deazaguanine reductase
NECEvent2014_3_1_scaffold_275_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11280..12785
DNA (1506bp) protein (502aa)
Di-tripeptide transporter, putative n=45 Tax=Staphylococcus epidermidis RepID=Q5HR04_STAEQ rbh
Di/tripeptide permease YjdL
Di-tripeptide transporter, putative {ECO:0000313|EMBL:AAW53772.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35
NECEvent2014_3_1_scaffold_275_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13069..13230
DNA (162bp) protein (54aa)
Uncharacterized protein n=25 Tax=Staphylococcus epidermidis RepID=Q8CTG6_STAES
hypothetical protein
IS1272, transposase {ECO:0000313|EMBL:EFE58027.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_1_scaffold_275_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13440..14363
DNA (924bp) protein (308aa)
Putative lipid kinase SERP0390; EC=2.7.1.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative lipid kinase SERP0390 n=43 Tax=Staphylococcus epidermidis RepID=Y390_STAEQ rbh
Transcription regulator [contains diacylglycerol kinase catalytic domain]
NECEvent2014_3_1_scaffold_275_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

14762..17371
DNA (2610bp) protein (870aa)
Alcohol dehydrogenase ; Acetaldehyde dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, iron-containing n=23 Tax=Staphylococcus RepID=Q5HR06_STAEQ rbh
Aldehyde-alcohol dehydrogenase {ECO:0000256|PIRNR:PIRNR000111}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_3_1_scaffold_275_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17438..17977)
DNA (540bp) protein (180aa)
Putative 5'(3')-deoxyribonucleotidase; EC=3.1.3.-;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Putative 5'(3')-deoxyribonucleotidase n=41 Tax=Staphylococcus epidermidis RepID=53DR_STAEQ rbh
hypothetical protein
NECEvent2014_3_1_scaffold_275_18

Not on your lists

comp(18100..19221)
DNA (1122bp) protein (374aa)
Biosynthetic Aromatic amino acid aminotransferase beta (EC:2.6.1.57)
Histidinol-phosphate aminotransferase n=36 Tax=Staphylococcus epidermidis RepID=HIS8_STAEQ rbh
Histidinol-phosphate aminotransferase {ECO:0000313|EMBL:ETJ19869.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_1_scaffold_275_19

Not on your lists

comp(19358..20872)
DNA (1515bp) protein (505aa)
ABC transporter, permease protein n=30 Tax=Staphylococcus epidermidis RepID=Q5HR09_STAEQ rbh
ABC transporter permease
Uncharacterized protein {ECO:0000313|EMBL:ETJ19868.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_1_scaffold_275_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20865..21839)
DNA (975bp) protein (325aa)
Glycine betaine ABC transport system, ATP-binding protein OpuAA (EC:3.6.3.32)
ABC transporter, ATP-binding protein n=22 Tax=Staphylococcus epidermidis RepID=Q5HR10_STAEQ rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE58021.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey
NECEvent2014_3_1_scaffold_275_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22039..22995)
DNA (957bp) protein (319aa)
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:EFE58020.1}; EC=3.6.1.- {ECO:0000313|EMBL:EFE58020.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Sta
ATP-dependent DNA helicase RecQ n=1 Tax=Staphylococcus epidermidis M23864:W2(grey) RepID=D4FNF3_STAEP rbh
ATP-dependent DNA helicase RecQ
Displaying 21 items

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