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NECEvent2014_3_1_scaffold_564

Alias: 173_005_scaffold_564

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_1_scaffold_564_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3..239
DNA (237bp) protein (79aa)
Cof-like hydrolase n=2 Tax=Staphylococcus epidermidis RepID=H0DRK4_STAEP
Hydrolase (HAD superfamily)
Cof-like hydrolase, HAD-superfamily, subfamily IIB {ECO:0000313|EMBL:AAW55104.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis
NECEvent2014_3_1_scaffold_564_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(544..1695)
DNA (1152bp) protein (384aa)
Lytic regulatory protein, putative n=40 Tax=Staphylococcus epidermidis RepID=Q5HM71_STAEQ rbh
lytic regulatory protein
Lytic regulatory protein, putative {ECO:0000313|EMBL:AAW55103.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 359
NECEvent2014_3_1_scaffold_564_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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1783..2559
DNA (777bp) protein (259aa)
Uncharacterized protein n=50 Tax=Staphylococcus epidermidis RepID=Q8CRL3_STAES rbh
hypothetical protein
Putative toxin-antitoxin system toxin component, PIN family {ECO:0000313|EMBL:EFE60194.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
NECEvent2014_3_1_scaffold_564_4

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comp(2820..3773)
DNA (954bp) protein (318aa)
CzrB protein n=50 Tax=Staphylococcus epidermidis RepID=Q8CNH2_STAES rbh
Zn(II) and Co(II) transmembrane diffusion facilitator
CzrB protein {ECO:0000313|EMBL:ETJ19278.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_1_scaffold_564_5

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comp(3760..4122)
DNA (363bp) protein (121aa)
Repressor protein n=42 Tax=Staphylococcus epidermidis RepID=Q8CNH3_STAES
repressor protein
Transcriptional regulator CzrA {ECO:0000313|EMBL:ETJ19277.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_1_scaffold_564_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4246..4902
DNA (657bp) protein (219aa)
NAD dependent epimerase/dehydratase family protein n=31 Tax=Staphylococcus epidermidis RepID=C5QCV0_STAEP rbh
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EFE60191.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis
oxidoreductase ylbE
NECEvent2014_3_1_scaffold_564_7

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5100..5249
DNA (150bp) protein (50aa)
Uncharacterized protein n=4 Tax=Staphylococcus epidermidis RepID=Q5HM76_STAEQ
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETJ19275.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_1_scaffold_564_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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5544..6482
DNA (939bp) protein (313aa)
mannose-6-phosphate isomerase, class I (EC:5.3.1.8)
Mannose-6-phosphate isomerase, class I {ECO:0000313|EMBL:AAW55090.1}; EC=5.3.1.8 {ECO:0000313|EMBL:AAW55090.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" sour
Mannnose-6 phospate isomelase pmi n=19 Tax=Staphylococcus epidermidis RepID=Q8CNH4_STAES rbh
NECEvent2014_3_1_scaffold_564_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6537..6764
DNA (228bp) protein (76aa)
Uncharacterized protein n=45 Tax=Staphylococcus epidermidis RepID=Q5HM78_STAEQ
Hypothetical protein SAV2142
Uncharacterized protein {ECO:0000313|EMBL:EES37315.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_3_1_scaffold_564_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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6997..8373
DNA (1377bp) protein (459aa)
Uncharacterized protein n=2 Tax=Staphylococcus epidermidis RepID=J0E3P1_STAEP rbh
Hypothetical protein SAV2141
Uncharacterized protein {ECO:0000313|EMBL:AAW55088.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_3_1_scaffold_564_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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8554..8964
DNA (411bp) protein (137aa)
Uncharacterized protein n=76 Tax=Staphylococcus epidermidis RepID=Q5HM80_STAEQ
Hypothetical protein SAV2140
Uncharacterized protein {ECO:0000313|EMBL:ESV19706.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_3_1_scaffold_564_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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9152..9598
DNA (447bp) protein (149aa)
DNA protection during starvation protein 1 n=8 Tax=Staphylococcus epidermidis RepID=H3V3E0_STAEP rbh
general stress protein 20U
Ferritin-like protein {ECO:0000313|EMBL:EES37311.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_3_1_scaffold_564_13

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comp(9722..10432)
DNA (711bp) protein (237aa)
deoD; purine nucleoside phosphorylase (EC:2.4.2.1)
Purine nucleoside phosphorylase DeoD-type n=27 Tax=Staphylococcus epidermidis RepID=Q5HM82_STAEQ rbh
Purine nucleoside phosphorylase DeoD-type {ECO:0000313|EMBL:ETJ19269.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_3_1_scaffold_564_14

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10636..11238
DNA (603bp) protein (201aa)
Deoxyribose-phosphate aldolase (EC:4.1.2.4)
Deoxyribose-phosphate aldolase n=8 Tax=Staphylococcus epidermidis RepID=H3V3E2_STAEP rbh
Deoxyribose-phosphate aldolase {ECO:0000313|EMBL:ETJ19268.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Displaying 14 items

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