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NECEvent2014_3_2_scaffold_130_8

Organism: NECEvent2014_3_2_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: comp(5494..6162)

Top 3 Functional Annotations

Value Algorithm Source
TetC n=182 Tax=Bacteria RepID=Q6QR70_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 449
  • Evalue 2.30e-123
  • rbh
tetC; tetracycline transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 449
  • Evalue 6.50e-124
  • rbh
Tetracycline transcriptional regulator {ECO:0000313|EMBL:EMD02341.1}; TaxID=1196033 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 222.0
  • Bit_score: 449
  • Evalue 3.20e-123

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 669
ATGTTCTTAAGATTGTCACGACCACATCATCATGATACCATAAACATACTGACGGTATGTTATTTTAAATCTATCATGGAAAATAAAAATCATCAACAAGAAAATTTTAAGAGTACCTATCAATCACTGGTTAACTCAGCACGAATATTGTTTGTTGAAAAAGGCTATCAAGCTGTTTCAATAGATGAGATCTCGGGAAAAGCGTTGGTGACCAAAGGTGCCTTTTATCATCACTTTAAAAATAAAAAACAATTACTCAGTGCCTGTTATAAGCAGCAATTAATTATGATTGATGCCTACATCACAACAAAAACTGATTTAACAAATGGTTGGTCTGCCTTAGAAAGTATATTTGAACATTATCTTGATTATATTATTGATAATAATAAAAACCTTATCCCTATCCAAGAAGTGATGCCTATCATTGGTTGGAATGAACTTGAAAAAATTAGCCTTGAATACATTACTGGTAAGGTAAACGCCATTGTCAGCAAATTGATCCAAGAGAACCAACTTAAAGCTTATGATGATGATGTGCTTAAAAACTTACTCAATGGCTGGTTTATGCATATCGCAATACATGCGAAAAACCTAAAAGAGCTTGCCGATAAAAAAGGCCAATTTATTGCTATTTACCGCGGCTTTTTATTGAGCTTGAAAGATAAATAA
PROTEIN sequence
Length: 223
MFLRLSRPHHHDTINILTVCYFKSIMENKNHQQENFKSTYQSLVNSARILFVEKGYQAVSIDEISGKALVTKGAFYHHFKNKKQLLSACYKQQLIMIDAYITTKTDLTNGWSALESIFEHYLDYIIDNNKNLIPIQEVMPIIGWNELEKISLEYITGKVNAIVSKLIQENQLKAYDDDVLKNLLNGWFMHIAIHAKNLKELADKKGQFIAIYRGFLLSLKDK*