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NECEvent2014_3_2_scaffold_130_9

Organism: NECEvent2014_3_2_UNK

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Location: 6175..6591

Top 3 Functional Annotations

Value Algorithm Source
TetD n=148 Tax=Bacteria RepID=Q6QR69_ECOLX similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 281
  • Evalue 4.00e-73
transposon Tn10 TetD protein similarity KEGG
DB: KEGG
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 281
  • Evalue 1.10e-73
Regulatory helix-turn-helix protein TetD {ECO:0000313|EMBL:CDN96640.1}; TetD {ECO:0000313|EMBL:AAS17732.1}; TetD protein {ECO:0000313|EMBL:CAP07769.1}; Tetracycline resistance protein D {ECO:0000313|E similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 138.0
  • Bit_score: 281
  • Evalue 5.50e-73

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGTATATTGAACAGCATTCTCGCTATCAAAATAAAGCTAATAACATCCAATTAAGATATGATGATAAGCAGTTTCATACAACGGTTATCAAAGATGTTCTATTATGGATTGAACATAATTTAGATCAGTCTTTACTGCTTGATGATGTGGCGAATAAAGCGGGTTATACCAAGTGGTATTTTCAGCGGCTGTTCAAAAAAGTAACAGGGGTCACACTGGCTAGCTATATTCGTGCTCGTCGTTTGACGAAAGCGGCTGTTGAGTTGAGGTTGACGAAAAAAACTATCCTTGAGATCGCATTAAAATATCAATTTGATTCCCAACAATCTTTTACACGTCGATTTAAGTACATTTTTAAGGTTACACCAAGTTATTATCGGCGTAATAAATTATGGGAATTGGAGGCAATGCACTGA
PROTEIN sequence
Length: 139
MYIEQHSRYQNKANNIQLRYDDKQFHTTVIKDVLLWIEHNLDQSLLLDDVANKAGYTKWYFQRLFKKVTGVTLASYIRARRLTKAAVELRLTKKTILEIALKYQFDSQQSFTRRFKYIFKVTPSYYRRNKLWELEAMH*