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NECEvent2014_3_2_UNK

In projects: NECEvent2014_3_2

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 51.67 Longest contig: 11.15 Kbp Bin length: 551.02 Kbp GC content: 34.29 %
Contigs count: 263 Features count: 704 rRNAs count: 3 tRNAs count: 29

Genome completeness

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Displaying items 101-150 of 263 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_312 173_006_scaffold_312
Genus: Bacillus (66.67%)
3 3926 bp 32.81 12.99 81.07
NECEvent2014_3_2_scaffold_573 173_006_scaffold_573
Order: Bacillales (66.67%)
3 2809 bp 33.57 17.52 95.16
NECEvent2014_3_2_scaffold_1798 173_006_scaffold_1798
Order: Bacillales (66.67%)
3 1311 bp 31.27 4.58 94.51
NECEvent2014_3_2_scaffold_1295 173_006_scaffold_1295
Phylum: Firmicutes (66.67%)
3 1673 bp 31.44 7.35 84.64
NECEvent2014_3_2_scaffold_1042 173_006_scaffold_1042
Species: Clostridium sp. Maddingley MBC34-26 (50%)
2 1933 bp 31.66 10.24 78.69
NECEvent2014_3_2_scaffold_592 173_006_scaffold_592
Species: Clostridium sp. IBUN125C (50%)
2 2767 bp 30.79 11.06 95.08
NECEvent2014_3_2_scaffold_1816 173_006_scaffold_1816
Species: Clostridium sp. BL8 (50%)
2 1300 bp 31.23 6.46 97.85
NECEvent2014_3_2_scaffold_1567 173_006_scaffold_1567
Species: Bacillus sp. X1(2014) (50%)
2 1469 bp 31.25 7.35 72.70
NECEvent2014_3_2_scaffold_869 173_006_scaffold_869
Species: Sporomusa ovata (100%)
2 2184 bp 32.69 13.46 87.50
NECEvent2014_3_2_scaffold_1581 173_006_scaffold_1581
Species: Pseudoalteromonas agarivorans (50%)
2 1458 bp 38.96 66.67 62.55
NECEvent2014_3_2_scaffold_2134 173_006_scaffold_2134
Species: Clostridium tetanomorphum (50%)
2 1153 bp 34.78 7.29 98.09
NECEvent2014_3_2_scaffold_1845 173_006_scaffold_1845
Species: Clostridium sp. BL8 (50%)
2 1284 bp 31.78 6.54 90.42
NECEvent2014_3_2_scaffold_1591 173_006_scaffold_1591
Species: Haemophilus paraphrohaemolyticus (50%)
2 1451 bp 41.83 8.99 95.73
NECEvent2014_3_2_scaffold_375 173_006_scaffold_375
Species: Geobacillus caldoxylosilyticus (50%)
2 3610 bp 31.77 12.80 92.74
NECEvent2014_3_2_scaffold_1598 173_006_scaffold_1598
Species: Alkaliphilus metalliredigens (50%)
2 1443 bp 30.77 6.03 83.58
NECEvent2014_3_2_scaffold_1854 173_006_scaffold_1854
Species: Clostridium sp. IBUN22A (50%)
2 1280 bp 26.41 4.22 89.77
NECEvent2014_3_2_scaffold_2400 173_006_scaffold_2400
Species: Paenibacillus sp. TCA20 (50%)
2 1059 bp 30.50 4.82 71.39
NECEvent2014_3_2_scaffold_639 173_006_scaffold_639
Species: Treponema lecithinolyticum (50%)
2 2587 bp 33.55 11.71 96.02
NECEvent2014_3_2_scaffold_1607 173_006_scaffold_1607
Species: Paenibacillus sp. MSt1 (50%)
2 1434 bp 29.99 7.95 98.74
NECEvent2014_3_2_scaffold_2156 173_006_scaffold_2156
Species: Treponema denticola (50%)
2 1144 bp 32.43 7.87 98.60
NECEvent2014_3_2_scaffold_2158 173_006_scaffold_2158
Species: Mesotoga infera (50%)
2 1143 bp 29.66 4.46 91.08
NECEvent2014_3_2_scaffold_1613 173_006_scaffold_1613
Species: BJP_IG2102_Clostridiales_34_350 (50%)
2 1430 bp 31.68 7.76 92.10
NECEvent2014_3_2_scaffold_2416 173_006_scaffold_2416
Species: Aggregatibacter actinomycetemcomitans (100%)
2 1053 bp 37.99 4.99 97.44
NECEvent2014_3_2_scaffold_1360 173_006_scaffold_1360
Species: Paenibacillus sp. Y412MC10 (50%)
2 1623 bp 29.39 5.91 97.04
NECEvent2014_3_2_scaffold_1112 173_006_scaffold_1112
Species: Haloplasma contractile (50%)
2 1864 bp 32.89 11.91 93.19
NECEvent2014_3_2_scaffold_914 173_006_scaffold_914
Species: Clostridium botulinum (50%)
2 2111 bp 34.34 11.80 76.46
NECEvent2014_3_2_scaffold_2184 173_006_scaffold_2184
Species: Clostridium botulinum (50%)
2 1133 bp 28.86 3.18 84.73
NECEvent2014_3_2_scaffold_1640 173_006_scaffold_1640 2 1414 bp 25.53 7.85 96.75
NECEvent2014_3_2_scaffold_2188 173_006_scaffold_2188
Species: Clostridium botulinum (100%)
2 1131 bp 29.89 4.77 52.79
NECEvent2014_3_2_scaffold_1643 173_006_scaffold_1643
Species: GWB2_Clostridiales_37_7_curated (100%)
2 1412 bp 31.44 5.95 93.91
NECEvent2014_3_2_scaffold_1899 173_006_scaffold_1899
Species: Geobacillus caldoxylosilyticus (100%)
2 1254 bp 29.82 4.31 83.25
NECEvent2014_3_2_scaffold_1647 173_006_scaffold_1647
Species: GWB2_Clostridiales_37_7_curated (50%)
2 1411 bp 33.10 7.44 96.10
NECEvent2014_3_2_scaffold_426 173_006_scaffold_426
Species: Clostridium botulinum (100%)
2 3344 bp 29.67 9.15 77.15
NECEvent2014_3_2_scaffold_2197 173_006_scaffold_2197
Species: Klebsiella oxytoca (100%)
2 1127 bp 54.92 2.66 94.50
NECEvent2014_3_2_scaffold_2454 173_006_scaffold_2454
Species: Selenomonas ruminantium (50%)
2 1037 bp 30.38 7.23 78.40
NECEvent2014_3_2_scaffold_944 173_006_scaffold_944
Species: Candidatus Competibacter denitrificans (50%)
2 2073 bp 33.19 11.72 85.96
NECEvent2014_3_2_scaffold_1407 173_006_scaffold_1407
Species: marine sediment metagenome (50%)
2 1584 bp 41.04 11.93 97.35
NECEvent2014_3_2_scaffold_1411 173_006_scaffold_1411
Species: Paramecium bursaria Chlorella virus MA-1D (50%)
2 1582 bp 30.72 4.17 59.73
NECEvent2014_3_2_scaffold_958 173_006_scaffold_958
Species: Lachnospiraceae bacterium 3-1 (50%)
2 2053 bp 32.59 4.53 97.47
NECEvent2014_3_2_scaffold_961 173_006_scaffold_961
Species: Brevibacillus laterosporus (50%)
2 2051 bp 33.30 10.39 93.76
NECEvent2014_3_2_scaffold_2217 173_006_scaffold_2217
Species: Paenibacillus sp. FSL R7-0273 (50%)
2 1121 bp 32.83 11.24 95.54
NECEvent2014_3_2_scaffold_452 173_006_scaffold_452
Species: Paenibacillus sp. Y412MC10 (50%)
2 3219 bp 31.75 7.64 87.70
NECEvent2014_3_2_scaffold_1932 173_006_scaffold_1932
Species: Thermosediminibacter oceani (50%)
2 1239 bp 32.85 12.35 95.64
NECEvent2014_3_2_scaffold_1166 173_006_scaffold_1166
Species: Vagococcus lutrae (50%)
2 1803 bp 30.45 5.32 98.17
NECEvent2014_3_2_scaffold_1422 173_006_scaffold_1422
Species: Clostridium botulinum (100%)
2 1575 bp 26.29 4.95 99.05
NECEvent2014_3_2_scaffold_1423 173_006_scaffold_1423
Species: GWF2_Firmicutes_51_9_curated (50%)
2 1575 bp 32.00 8.76 93.33
NECEvent2014_3_2_scaffold_1171 173_006_scaffold_1171
Species: Caldisalinibacter kiritimatiensis (50%)
2 1801 bp 31.59 6.50 95.95
NECEvent2014_3_2_scaffold_1683 173_006_scaffold_1683
Species: Clostridium tetani (50%)
2 1386 bp 32.11 4.98 98.27
NECEvent2014_3_2_scaffold_1939 173_006_scaffold_1939
Species: Desulfitobacterium dichloroeliminans (50%)
2 1236 bp 34.79 15.90 91.50
NECEvent2014_3_2_scaffold_1429 173_006_scaffold_1429
Species: Haemophilus influenzae (50%)
2 1564 bp 37.21 4.99 77.49
Displaying items 101-150 of 263 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.