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NECEvent2014_3_2_UNK

In projects: NECEvent2014_3_2

Metagenomic Context

METAGENOME

Properties

Avg. coverage: 51.67 Longest contig: 11.15 Kbp Bin length: 551.02 Kbp GC content: 34.29 %
Contigs count: 263 Features count: 704 rRNAs count: 3 tRNAs count: 29

Genome completeness

partial RP 0 / 55 BSCG 0 / 51 ASCG 0 / 38
Displaying items 151-200 of 263 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_980 173_006_scaffold_980
Species: Clostridium sp. IBUN13A (50%)
2 2013 bp 33.43 16.62 96.13
NECEvent2014_3_2_scaffold_2492 173_006_scaffold_2492
Species: Alkaliphilus oremlandii (50%)
2 1024 bp 28.71 6.15 87.01
NECEvent2014_3_2_scaffold_1693 173_006_scaffold_1693
Species: Aerococcus urinae (50%)
2 1381 bp 30.12 7.60 90.15
NECEvent2014_3_2_scaffold_2239 173_006_scaffold_2239
Species: Clostridium butyricum (50%)
2 1114 bp 29.17 6.19 98.03
NECEvent2014_3_2_scaffold_2240 173_006_scaffold_2240
Species: RIFOXYB2_FULL_WOR_2_38_16_curated (50%)
2 1113 bp 28.39 7.82 93.53
NECEvent2014_3_2_scaffold_1695 173_006_scaffold_1695
Species: Firmicutes bacterium CAG:137 (100%)
2 1380 bp 32.68 8.26 98.70
NECEvent2014_3_2_scaffold_2498 173_006_scaffold_2498
Species: Gemella haemolysans (100%)
2 1021 bp 32.62 5.58 100.78
NECEvent2014_3_2_scaffold_987 173_006_scaffold_987
Species: Leuconostoc sp. DORA_2 (100%)
2 2003 bp 31.90 10.48 94.21
NECEvent2014_3_2_scaffold_988 173_006_scaffold_988
Species: Clostridium ultunense (50%)
2 2002 bp 33.07 12.29 91.41
NECEvent2014_3_2_scaffold_1699 173_006_scaffold_1699
Species: [Clostridium] saccharolyticum (50%)
2 1377 bp 35.37 44.23 96.73
NECEvent2014_3_2_scaffold_2502 173_006_scaffold_2502
Species: Paenibacillus sp. FSL H8-237 (50%)
2 1017 bp 32.15 7.08 88.20
NECEvent2014_3_2_scaffold_1706 173_006_scaffold_1706
Species: Kosmotoga olearia (50%)
2 1375 bp 28.15 3.93 76.36
NECEvent2014_3_2_scaffold_1455 173_006_scaffold_1455
Species: Tepidanaerobacter acetatoxydans (50%)
2 1539 bp 32.55 9.65 96.10
NECEvent2014_3_2_scaffold_745 173_006_scaffold_745
Species: Clostridium ultunense (50%)
2 2374 bp 37.11 17.38 99.07
NECEvent2014_3_2_scaffold_2001 173_006_scaffold_2001
Species: Clostridium argentinense (50%)
2 1208 bp 30.13 5.96 98.59
NECEvent2014_3_2_scaffold_1458 173_006_scaffold_1458
Species: Coprobacillus sp. 3_3_56FAA (50%)
2 1538 bp 29.71 7.22 93.63
NECEvent2014_3_2_scaffold_1976 173_006_scaffold_1976
Species: GWC2_Chloroflexi_49_37_curated (50%)
2 1222 bp 31.75 9.08 86.42
NECEvent2014_3_2_scaffold_2011 173_006_scaffold_2011
Species: Bacillus thuringiensis (50%)
2 1205 bp 45.06 3.61 93.86
NECEvent2014_3_2_scaffold_245 173_006_scaffold_245
Species: Clostridium sporogenes (50%)
2 4449 bp 35.06 17.26 91.91
NECEvent2014_3_2_scaffold_1724 173_006_scaffold_1724
Species: Clostridium aceticum (50%)
2 1363 bp 29.64 5.50 64.93
NECEvent2014_3_2_scaffold_247 173_006_scaffold_247
Species: Haemophilus paraphrohaemolyticus (50%)
2 4434 bp 42.67 8.32 99.86
NECEvent2014_3_2_scaffold_1726 173_006_scaffold_1726 2 1362 bp 29.74 7.71 67.40
NECEvent2014_3_2_scaffold_1481 173_006_scaffold_1481
Species: Candidatus Liberibacter solanacearum (50%)
2 1522 bp 35.81 14.09 49.08
NECEvent2014_3_2_scaffold_1482 173_006_scaffold_1482
Species: Fusobacterium mortiferum (100%)
2 1521 bp 32.35 7.89 90.73
NECEvent2014_3_2_scaffold_1487 173_006_scaffold_1487
Species: Pelobacter carbinolicus (50%)
2 1520 bp 30.79 5.72 88.22
NECEvent2014_3_2_scaffold_2290 173_006_scaffold_2290
Species: Bacillus amyloliquefaciens (50%)
2 1096 bp 30.47 7.39 78.28
NECEvent2014_3_2_scaffold_2549 173_006_scaffold_2549 2 1006 bp 38.27 15.21 95.43
NECEvent2014_3_2_scaffold_2301 173_006_scaffold_2301
Species: Lysinibacillus fusiformis (50%)
2 1094 bp 31.26 6.58 97.08
NECEvent2014_3_2_scaffold_2560 173_006_scaffold_2560
Species: Sporolactobacillus laevolacticus (100%)
2 1001 bp 29.77 5.39 98.90
NECEvent2014_3_2_scaffold_1504 173_006_scaffold_1504
Species: Clostridiales bacterium oral taxon 876 (50%)
2 1505 bp 30.90 8.37 86.31
NECEvent2014_3_2_scaffold_1764 173_006_scaffold_1764
Species: Pelosinus sp. UFO1 (50%)
2 1333 bp 28.21 3.49 92.05
NECEvent2014_3_2_scaffold_295 173_006_scaffold_295
Species: Natranaerobius thermophilus (50%)
2 4073 bp 32.58 12.96 92.59
NECEvent2014_3_2_scaffold_1006 173_006_scaffold_1006
Species: Treponema vincentii (50%)
2 1981 bp 32.71 19.54 97.98
NECEvent2014_3_2_scaffold_296 173_006_scaffold_296
Species: Alkaliphilus oremlandii (50%)
2 4071 bp 32.45 9.80 91.60
NECEvent2014_3_2_scaffold_1266 173_006_scaffold_1266
Species: Aneurinibacillus aneurinilyticus (50%)
2 1692 bp 36.11 22.52 78.72
NECEvent2014_3_2_scaffold_1011 173_006_scaffold_1011 2 1976 bp 38.01 23.76 63.77
NECEvent2014_3_2_scaffold_1527 173_006_scaffold_1527
Species: Parvimonas micra (50%)
2 1488 bp 35.75 18.75 92.34
NECEvent2014_3_2_scaffold_1016 173_006_scaffold_1016
Species: Clostridiales bacterium S7-1-4 (50%)
2 1968 bp 28.30 4.73 95.12
NECEvent2014_3_2_scaffold_1022 173_006_scaffold_1022
Species: Halomonas sp. A3H3 (50%)
2 1955 bp 33.66 11.43 98.52
NECEvent2014_3_2_scaffold_2080 173_006_scaffold_2080
Species: Geobacillus caldoxylosilyticus (50%)
2 1176 bp 30.19 4.34 96.43
NECEvent2014_3_2_scaffold_2082 173_006_scaffold_2082
Species: Klebsiella oxytoca (100%)
2 1175 bp 56.85 2.17 96.26
NECEvent2014_3_2_scaffold_1284 173_006_scaffold_1284
Species: Enterococcus avium (50%)
2 1679 bp 32.28 8.22 92.73
NECEvent2014_3_2_scaffold_1285 173_006_scaffold_1285
Species: Clostridium kluyveri (50%)
2 1679 bp 33.83 49.32 79.87
NECEvent2014_3_2_scaffold_1544 173_006_scaffold_1544
Species: GWF2_Bacteroidetes_35_48_curated (50%)
2 1480 bp 27.77 5.47 94.46
NECEvent2014_3_2_scaffold_2347 173_006_scaffold_2347
Species: Mollicutes bacterium HR2 (50%)
2 1082 bp 27.73 4.44 83.73
NECEvent2014_3_2_scaffold_1294 173_006_scaffold_1294
Species: Caldicellulosiruptor hydrothermalis (50%)
2 1674 bp 30.82 7.35 87.46
NECEvent2014_3_2_scaffold_1552 173_006_scaffold_1552
Species: Paenibacillus sp. FSL R5-192 (100%)
1 1476 bp 30.49 6.20 99.80
NECEvent2014_3_2_scaffold_1809 173_006_scaffold_1809
Species: Candidatus Kuenenia stuttgartiensis (100%)
1 1304 bp 31.98 11.73 79.83
NECEvent2014_3_2_scaffold_2356 173_006_scaffold_2356 1 1079 bp 37.91 30.58 44.49
NECEvent2014_3_2_scaffold_2364 173_006_scaffold_2364
Species: Geomicrobium sp. JCM 19038 (100%)
1 1077 bp 34.45 21.59 95.54
Displaying items 151-200 of 263 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.