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NECEvent2014_3_2_scaffold_15

Alias: 173_006_scaffold_15

Search features with annotation key words

Displaying items 1-30 of 356 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_15_1
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(213..2786)
DNA (2574bp) protein (858aa)
Chaperone ClpB n=1 Tax=Citrobacter sp. KTE151 RepID=R8WW97_9ENTR rbh
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter
protein disaggregation chaperone
NECEvent2014_3_2_scaffold_15_2
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2916..3647)
DNA (732bp) protein (244aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WR50_9ENTR rbh
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter
hypothetical protein
NECEvent2014_3_2_scaffold_15_3
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3644..4624)
DNA (981bp) protein (327aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
Pseudouridine synthase n=2 Tax=Citrobacter RepID=R8V7Q2_9ENTR rbh
rluD; 23S rRNA pseudouridylate synthase
NECEvent2014_3_2_scaffold_15_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4756..5493
DNA (738bp) protein (246aa)
Outer membrane protein assembly factor BamD n=2 Tax=Citrobacter RepID=R8VBG4_9ENTR rbh
Outer membrane protein assembly factor BamD {ECO:0000256|HAMAP-Rule:MF_00922}; Flags: Precursor;; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
membrane biogenesis protein
NECEvent2014_3_2_scaffold_15_5
Citrobacter sp. MGH 55, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5720..6100
DNA (381bp) protein (127aa)
Ribosome-associated inhibitor A n=11 Tax=Citrobacter RepID=C1MA77_9ENTR
Ribosome-associated inhibitor A {ECO:0000313|EMBL:KDF07757.1}; TaxID=1439319 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citro
translation inhibitor protein RaiA
NECEvent2014_3_2_scaffold_15_6
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6351..7511
DNA (1161bp) protein (387aa)
Chorismate mutase {ECO:0000313|EMBL:KKC62219.1}; EC=4.2.1.51 {ECO:0000313|EMBL:KKC62219.1};; EC=5.4.99.5 {ECO:0000313|EMBL:KKC62219.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacte
pheA; chorismate mutase (EC:4.2.1.51 5.4.99.5) rbh
P-protein n=2 Tax=Citrobacter RepID=R8V6W0_9ENTR rbh
NECEvent2014_3_2_scaffold_15_7
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7613..8734)
DNA (1122bp) protein (374aa)
tyrA; chorismate mutase (EC:1.3.1.12 5.4.99.5)
T-protein n=2 Tax=Citrobacter RepID=R8V659_9ENTR rbh
T-protein {ECO:0000256|PIRNR:PIRNR001499}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
NECEvent2014_3_2_scaffold_15_8
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8745..9815)
DNA (1071bp) protein (357aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=2 Tax=Citrobacter RepID=R8V7Q7_9ENTR rbh
NECEvent2014_3_2_scaffold_15_9
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10031..10405
DNA (375bp) protein (125aa)
Lipoprotein n=1 Tax=Citrobacter sp. KTE32 RepID=R8VBH0_9ENTR
Lipoprotein {ECO:0000313|EMBL:EOQ47350.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
lipoprotein
NECEvent2014_3_2_scaffold_15_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10564..11082
DNA (519bp) protein (173aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE32 RepID=R8V6Y4_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC62215.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter ama
hypothetical protein
NECEvent2014_3_2_scaffold_15_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11075..12301
DNA (1227bp) protein (409aa)
Diguanylate cyclase n=2 Tax=Citrobacter RepID=R8V6W6_9ENTR rbh
Diguanylate cyclase {ECO:0000313|EMBL:KKC62214.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalona
diguanylate cyclase
NECEvent2014_3_2_scaffold_15_12
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12312..12794
DNA (483bp) protein (161aa)
Outer membrane lipoprotein n=2 Tax=Citrobacter RepID=R8V666_9ENTR rbh
Outer membrane lipoprotein {ECO:0000313|EMBL:EOQ47353.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacte
membrane protein
NECEvent2014_3_2_scaffold_15_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(12922..13269)
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=203 Tax=Bacteria RepID=RL19_CROS8
rplS; 50S ribosomal protein L19
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_3_2_scaffold_15_14
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13311..14078)
DNA (768bp) protein (256aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltrans
tRNA (guanine-N(1)-)-methyltransferase n=1 Tax=Citrobacter sp. KTE32 RepID=R8VBH6_9ENTR rbh
trmD; tRNA (guanine-N1)-methyltransferase
NECEvent2014_3_2_scaffold_15_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14123..14671)
DNA (549bp) protein (183aa)
Ribosome maturation factor RimM n=10 Tax=Citrobacter RepID=C1MA90_9ENTR rbh
rimM; 16S rRNA-processing protein RimM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_3_2_scaffold_15_16
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(14690..14938)
DNA (249bp) protein (83aa)
30S ribosomal protein S16 n=12 Tax=Enterobacteriaceae RepID=D4BHQ5_9ENTR
30S ribosomal protein S16
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun
NECEvent2014_3_2_scaffold_15_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(15192..16553)
DNA (1362bp) protein (454aa)
Signal recognition particle protein n=8 Tax=Citrobacter RepID=C1MA92_9ENTR rbh
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enter
signal recognition particle rbh
NECEvent2014_3_2_scaffold_15_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16719..17510
DNA (792bp) protein (264aa)
Inner membrane protein ypjD n=10 Tax=Citrobacter RepID=C1MA93_9ENTR rbh
Inner membrane protein ypjD {ECO:0000313|EMBL:ETX69938.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
membrane protein
NECEvent2014_3_2_scaffold_15_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17529..18818
DNA (1290bp) protein (430aa)
UPF0053 inner membrane protein yfjD n=5 Tax=Citrobacter RepID=C1MA94_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:KKC62206.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter ama
hypothetical protein
NECEvent2014_3_2_scaffold_15_20
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18869..19462)
DNA (594bp) protein (198aa)
Protein GrpE n=8 Tax=Citrobacter RepID=J1FVX8_9ENTR rbh
Protein GrpE {ECO:0000256|HAMAP-Rule:MF_01151}; HSP-70 cofactor {ECO:0000256|HAMAP-Rule:MF_01151}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
heat shock protein GrpE
NECEvent2014_3_2_scaffold_15_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19585..20463
DNA (879bp) protein (293aa)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=35703 spe
Probable inorganic polyphosphate/ATP-NAD kinase n=2 Tax=Citrobacter RepID=R8V6X6_9ENTR rbh
ppnK; inorganic polyphosphate/ATP-NAD kinase
NECEvent2014_3_2_scaffold_15_22
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20549..22210
DNA (1662bp) protein (554aa)
DNA repair protein RecN n=1 Tax=Citrobacter sp. KTE32 RepID=R8V677_9ENTR rbh
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
recombination and repair protein
NECEvent2014_3_2_scaffold_15_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22360..22704
DNA (345bp) protein (115aa)
Outer membrane protein assembly factor BamE n=6 Tax=Enterobacteriaceae RepID=G9SAP5_CITFR
membrane biogenesis protein
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteri
NECEvent2014_3_2_scaffold_15_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22756..23052)
DNA (297bp) protein (99aa)
Protein RnfH 2 n=5 Tax=Enterobacteriaceae RepID=I6GYH4_SHIFL
UPF0125 protein P834_07805 {ECO:0000256|HAMAP-Rule:MF_00460}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
hypothetical protein
NECEvent2014_3_2_scaffold_15_25
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23036..23479)
DNA (444bp) protein (148aa)
Polyketide cyclase dehydrase and lipid transport family protein n=7 Tax=Citrobacter RepID=J1FVX2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:EOQ47366.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
hypothetical protein
NECEvent2014_3_2_scaffold_15_26
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23634..24116
DNA (483bp) protein (161aa)
SsrA-binding protein n=13 Tax=Enterobacteriaceae RepID=C1MAA1_9ENTR rbh
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citr
smpB; SsrA-binding protein
NECEvent2014_3_2_scaffold_15_27
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24698..35959
DNA (11262bp) protein (3754aa)
large repetitive protein n=1 Tax=Citrobacter freundii RepID=UPI000316BDC6 rbh
Large repetitive protein {ECO:0000313|EMBL:KKC62199.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter am
large repetitive protein
NECEvent2014_3_2_scaffold_15_28
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

36060..37469
DNA (1410bp) protein (470aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WRP2_9ENTR rbh
Type I secretion protein TolC {ECO:0000313|EMBL:KKC62198.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobact
type I secretion protein TolC
NECEvent2014_3_2_scaffold_15_29
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

37466..39652
DNA (2187bp) protein (729aa)
Uncharacterized protein n=1 Tax=Citrobacter sp. KTE151 RepID=R8WR40_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:EOQ47370.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
ATP-binding protein
NECEvent2014_3_2_scaffold_15_30
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

39633..40823
DNA (1191bp) protein (397aa)
HlyD family secretion protein n=1 Tax=Citrobacter freundii RepID=UPI0002DAFE96 rbh
Uncharacterized protein {ECO:0000313|EMBL:EOQ47371.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
secretion protein HlyD
Displaying items 1-30 of 356 in total

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