ggKbase home page

NECEvent2014_3_2_scaffold_49

Alias: 173_006_scaffold_49

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_49_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

318..1907
DNA (1590bp) protein (530aa)
Bifunctional purine biosynthesis protein PurH n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIM6_9ENTR rbh
Bifunctional purine biosynthesis protein PurH {ECO:0000256|HAMAP-Rule:MF_00139, ECO:0000256|SAAS:SAAS00010516}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; E
purH; bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase
NECEvent2014_3_2_scaffold_49_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1923..3212
DNA (1290bp) protein (430aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase (EC:6.3.4.13)
Phosphoribosylamine--glycine ligase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V049_9ENTR rbh
NECEvent2014_3_2_scaffold_49_3
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3209..4534)
DNA (1326bp) protein (442aa)
Transcriptional regulatory protein zraR n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIN9_9ENTR rbh
Transcriptional regulatory protein zraR {ECO:0000313|EMBL:EOQ44763.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" sourc
transcriptional regulator
NECEvent2014_3_2_scaffold_49_4
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4540..5925)
DNA (1386bp) protein (462aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
sensor protein ZraS n=1 Tax=Citrobacter freundii RepID=UPI0002DF4FFA rbh
sensor protein ZraS
NECEvent2014_3_2_scaffold_49_5
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6190..6630
DNA (441bp) protein (147aa)
Zinc resistance-associated protein n=2 Tax=Citrobacter RepID=R8UVP4_9ENTR rbh
Zinc resistance-associated protein {ECO:0000313|EMBL:EOQ44761.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Ci
zraP; zinc resistance protein
NECEvent2014_3_2_scaffold_49_6
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6690..7382)
DNA (693bp) protein (231aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVW1_9ENTR rbh
Uncharacterized protein {ECO:0000313|EMBL:EOQ44760.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
membrane protein
NECEvent2014_3_2_scaffold_49_7
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7394..7666)
DNA (273bp) protein (91aa)
DNA-binding protein HU-alpha n=586 Tax=Enterobacteriaceae RepID=DBHA_SALTI
transcriptional regulator HU subunit alpha
DNA-binding protein HU-alpha {ECO:0000313|EMBL:ACH51095.1}; TaxID=454166 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmonella
NECEvent2014_3_2_scaffold_49_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7853..8443)
DNA (591bp) protein (197aa)
Uncharacterized protein n=6 Tax=Enterobacteriaceae RepID=I6G6H7_SHIFL rbh
Uncharacterized protein {ECO:0000313|EMBL:KJC04472.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_3_2_scaffold_49_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8477..9157)
DNA (681bp) protein (227aa)
Endonuclease V {ECO:0000256|HAMAP-Rule:MF_00801}; EC=3.1.21.7 {ECO:0000256|HAMAP-Rule:MF_00801};; Deoxyinosine 3'endonuclease {ECO:0000256|HAMAP-Rule:MF_00801}; Deoxyribonuclease V {ECO:0000256|HAMAP-
endonuclease V (EC:3.1.21.7)
endonuclease VIII n=1 Tax=Citrobacter freundii RepID=UPI0002D65AB7 rbh
NECEvent2014_3_2_scaffold_49_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9167..10231)
DNA (1065bp) protein (355aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WJJ7_9ENTR rbh
NECEvent2014_3_2_scaffold_49_11
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10275..11048)
DNA (774bp) protein (258aa)
NADH pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00297, ECO:0000256|SAAS:SAAS00016168}; EC=3.6.1.22 {ECO:0000256|HAMAP-Rule:MF_00297};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteri
NADH pyrophosphatase n=2 Tax=Citrobacter RepID=R8UVV5_9ENTR rbh
nudC; NADH pyrophosphatase
NECEvent2014_3_2_scaffold_49_12
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11145..11633
DNA (489bp) protein (163aa)
Regulator of sigma D n=2 Tax=Citrobacter RepID=R8V037_9ENTR rbh
Regulator of sigma D {ECO:0000256|HAMAP-Rule:MF_01181, ECO:0000256|SAAS:SAAS00010112}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrob
anti-RNA polymerase sigma 70 factor
NECEvent2014_3_2_scaffold_49_13
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11889..13787
DNA (1899bp) protein (633aa)
Phosphomethylpyrimidine synthase {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007814}; EC=4.1.99.17 {ECO:0000256|HAMAP-Rule:MF_00089, ECO:0000256|SAAS:SAAS00007809};; Hydroxymethylpyrimidi
Phosphomethylpyrimidine synthase n=1 Tax=Citrobacter sp. KTE151 RepID=R8WIM9_9ENTR rbh
thiamine biosynthesis protein ThiC
NECEvent2014_3_2_scaffold_49_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13787..14422
DNA (636bp) protein (212aa)
Thiamine-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00097, ECO:0000256|RuleBase:RU003826}; Short=TP synthase {ECO:0000256|HAMAP-Rule:MF_00097};; Short=TPS {ECO:0000256|HAMAP-Rule:MF_00097};; EC=2.5
thiamine-phosphate pyrophosphorylase (EC:2.5.1.3)
Thiamine-phosphate synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UV20_9ENTR rbh
NECEvent2014_3_2_scaffold_49_15
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14415..15173
DNA (759bp) protein (253aa)
Sulfur carrier protein ThiS adenylyltransferase n=2 Tax=Citrobacter RepID=R8UVN4_9ENTR rbh
Sulfur carrier protein ThiS adenylyltransferase {ECO:0000313|EMBL:EOQ44751.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.
thiF; thiamine biosynthesis protein
NECEvent2014_3_2_scaffold_49_16
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15154..15354
DNA (201bp) protein (67aa)
Sulfur carrier protein ThiS n=2 Tax=Citrobacter RepID=R8UVU9_9ENTR
Sulfur carrier protein ThiS {ECO:0000313|EMBL:EOQ44750.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobact
thiS; thiamine biosynthesis protein ThiS
NECEvent2014_3_2_scaffold_49_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15356..16126
DNA (771bp) protein (257aa)
Thiazole synthase {ECO:0000256|HAMAP-Rule:MF_00443}; EC=2.8.1.10 {ECO:0000256|HAMAP-Rule:MF_00443};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
Thiazole synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V029_9ENTR rbh
thiG; thiazole synthase
NECEvent2014_3_2_scaffold_49_18
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16123..17256
DNA (1134bp) protein (378aa)
2-iminoacetate synthase n=1 Tax=Citrobacter sp. KTE32 RepID=R8UWR3_9ENTR rbh
Thiamine biosynthesis protein ThiH {ECO:0000313|EMBL:KKC61566.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citr
thiH; thiamine biosynthesis protein ThiH
NECEvent2014_3_2_scaffold_49_19
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17377..17589)
DNA (213bp) protein (71aa)
Cold shock-like protein CspI n=2 Tax=Citrobacter RepID=R8UV14_9ENTR
Cold shock-like protein CspI {ECO:0000313|EMBL:EOQ44747.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobac
cold-shock DNA-binding protein family protein
NECEvent2014_3_2_scaffold_49_20
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18680..18985
DNA (306bp) protein (102aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVM9_9ENTR
PTS cellobiose transporter subunit IIB {ECO:0000313|EMBL:KKC61564.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="
hypothetical protein
NECEvent2014_3_2_scaffold_49_21
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18990..19307
DNA (318bp) protein (106aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=R8UVU4_9ENTR
PTS lactose transporter subunit IIA {ECO:0000313|EMBL:KKC61563.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Cit
PTS lactose transporter subunit IIA
NECEvent2014_3_2_scaffold_49_22
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19455..23678)
DNA (4224bp) protein (1408aa)
DNA-directed RNA polymerase subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322}; Short=RNAP subunit beta' {ECO:0000256|HAMAP-Rule:MF_01322};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01322};; RNA polymerase
DNA-directed RNA polymerase subunit beta' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta' n=2 Tax=Citrobacter RepID=R8V023_9ENTR rbh
NECEvent2014_3_2_scaffold_49_23
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23755..27783)
DNA (4029bp) protein (1343aa)
rpoB; DNA-directed RNA polymerase subunit beta (EC:2.7.7.6)
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase su
DNA-directed RNA polymerase subunit beta n=10 Tax=Citrobacter RepID=C1MGC0_9ENTR rbh
NECEvent2014_3_2_scaffold_49_24
Salmonella enterica, Salmonella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28104..28469)
DNA (366bp) protein (122aa)
50S ribosomal protein L7/L12 n=561 Tax=Enterobacteriaceae RepID=RL7_SALA4
rplL; 50S ribosomal subunit protein L7/L12
50S ribosomal protein L7/L12 {ECO:0000256|HAMAP-Rule:MF_00368}; TaxID=1348563 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Salmonella.;" source="Salmo
NECEvent2014_3_2_scaffold_49_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(28536..29033)
DNA (498bp) protein (166aa)
50S ribosomal protein L10 n=4 Tax=Enterobacteriaceae RepID=G2SA04_ENTAL rbh
rplJ; 50S ribosomal protein L10
50S ribosomal protein L10 {ECO:0000256|HAMAP-Rule:MF_00362, ECO:0000256|RuleBase:RU003636}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
NECEvent2014_3_2_scaffold_49_26
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(29392..30099)
DNA (708bp) protein (236aa)
50S ribosomal protein L1 n=2 Tax=Citrobacter RepID=R8UVT9_9ENTR rbh
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacte
rplA; 50S ribosomal protein L1
NECEvent2014_3_2_scaffold_49_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(30103..30531)
DNA (429bp) protein (143aa)
50S ribosomal protein L11 n=10 Tax=Citrobacter RepID=C1MGC4_9ENTR
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Cit
50S ribosomal protein L11
NECEvent2014_3_2_scaffold_49_28
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30687..31232)
DNA (546bp) protein (182aa)
Transcription termination/antitermination protein NusG n=11 Tax=Enterobacteriaceae RepID=C1MGC5_9ENTR rbh
nusG; transcription antiterminator NusG
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
NECEvent2014_3_2_scaffold_49_29
Kosakonia sacchari, Kosakonia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31234..31617)
DNA (384bp) protein (128aa)
Protein translocase subunit SecE n=16 Tax=Enterobacteriaceae RepID=R9VNH6_9ENTR
secE; preprotein translocase subunit SecE
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1235834 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Kosakonia.;" source="Ko
NECEvent2014_3_2_scaffold_49_30
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31848..31961)
DNA (114bp) protein (38aa)
Elongation factor Tu {ECO:0000313|EMBL:AKE61026.1}; EC=3.6.5.3 {ECO:0000313|EMBL:AKE61026.1};; TaxID=1261127 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
Elongation factor Tu n=11 Tax=Enterobacteriaceae RepID=A8AQM7_CITK8
translation elongation factor 1A (EF-1A/EF-Tu)
Displaying 30 items

View Taxonomy