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NECEvent2014_3_2_scaffold_0

Alias: 173_006_scaffold_0

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Displaying items 1-30 of 784 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_0_trna_1
unknown

Not on your lists

1086..1158
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_0_trna_2
unknown

Not on your lists

1274..1347
DNA (74bp)
transferRNA
NECEvent2014_3_2_scaffold_0_1
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1476..1754)
DNA (279bp) protein (93aa)
Uncharacterized protein n=2 Tax=Veillonella parvula RepID=T0UFZ3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQC66078.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula HSIVP1.;
helix-turn-helix domain-containing protein
NECEvent2014_3_2_scaffold_0_2
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

1923..3623
DNA (1701bp) protein (567aa)
UPI0003D619C3 related cluster n=1 Tax=unknown RepID=UPI0003D619C3 rbh
RND efflux system, outer membrane lipoprotein, NodT family {ECO:0000313|EMBL:ETI98871.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" s
NodT family RND efflux system outer membrane lipoprotein
NECEvent2014_3_2_scaffold_0_3
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3639..4685
DNA (1047bp) protein (349aa)
Putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T4E5_9FIRM rbh
Putative membrane fusion protein (MFP) component of efflux pump, membrane anchor protein YbhG {ECO:0000313|EMBL:EQC66076.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales
hemolysin D
NECEvent2014_3_2_scaffold_0_4
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4695..6494
DNA (1800bp) protein (600aa)
UPI0003D5A6DF related cluster n=3 Tax=unknown RepID=UPI0003D5A6DF rbh
ABC transporter related protein {ECO:0000313|EMBL:ETI98869.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar D
ABC transporter
NECEvent2014_3_2_scaffold_0_5
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6491..7603
DNA (1113bp) protein (371aa)
Biotin synthesis protein BioC n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIZ7_9FIRM rbh
Biotin synthesis protein BioC {ECO:0000313|EMBL:EFG24094.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.
ABC transporter
NECEvent2014_3_2_scaffold_0_6
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7603..8718
DNA (1116bp) protein (372aa)
BioH protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIZ6_9FIRM rbh
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;
ABC transporter
NECEvent2014_3_2_scaffold_0_trna_3
unknown

Not on your lists

9593..9674
DNA (82bp)
transferRNA
NECEvent2014_3_2_scaffold_0_7
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9867..13163
DNA (3297bp) protein (1099aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=686660 species="Bacteria; Fi
Transcription-repair-coupling factor n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQZ4_9FIRM rbh
transcription-repair coupling factor
NECEvent2014_3_2_scaffold_0_8
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13160..14767
DNA (1608bp) protein (536aa)
Putative stage V sporulation protein B n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KP52_9FIRM rbh
Polysaccharide biosynthesis protein {ECO:0000313|EMBL:ETI98865.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella disp
polysaccharide biosynthesis protein
NECEvent2014_3_2_scaffold_0_9
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14751..15521
DNA (771bp) protein (257aa)
MazG protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIZ0_9FIRM rbh
MazG protein {ECO:0000313|EMBL:EFG24087.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
MazG family protein
NECEvent2014_3_2_scaffold_0_10
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15573..15872
DNA (300bp) protein (100aa)
Histone family protein DNA-binding protein n=6 Tax=Veillonella RepID=D1BNT0_VEIPT
histone family protein DNA-binding protein
DNA-binding protein HU-beta {ECO:0000313|EMBL:EGL77613.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-0
NECEvent2014_3_2_scaffold_0_11
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15955..17109
DNA (1155bp) protein (385aa)
Monogalactosyldiacylglycerol synthase, C-terminal domain protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQZ0_9FIRM rbh
Putative processive diacylglycerol glucosyltransferase {ECO:0000313|EMBL:EFG24085.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source
monogalactosyldiacylglycerol synthase
NECEvent2014_3_2_scaffold_0_12
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(17159..17473)
DNA (315bp) protein (105aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIY7_9FIRM
Putative uncharacterized protein {ECO:0000313|EMBL:EFG24084.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
hypothetical protein
NECEvent2014_3_2_scaffold_0_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17586..19601
DNA (2016bp) protein (672aa)
UPI0003D595A8 related cluster n=2 Tax=unknown RepID=UPI0003D595A8 rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETI98860.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dis
ABC transporter
NECEvent2014_3_2_scaffold_0_14
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19734..21203
DNA (1470bp) protein (490aa)
Periplasmic [Fe] hydrogenase large subunit n=2 Tax=Veillonella RepID=T0UFW9_9FIRM rbh
Ferredoxin hydrogenase {ECO:0000313|EMBL:EFG25873.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_27.;"
hydrogenase, Fe-only
NECEvent2014_3_2_scaffold_0_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21477..22106
DNA (630bp) protein (210aa)
Phosphate transport regulator (PhoU-like) n=4 Tax=Veillonella RepID=T0T4H9_9FIRM rbh
Putative phosphate transport regulator {ECO:0000313|EMBL:EFG24081.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp
hypothetical protein
NECEvent2014_3_2_scaffold_0_16
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

22099..23097
DNA (999bp) protein (333aa)
Phosphate transporter n=2 Tax=Veillonella RepID=D6KIY3_9FIRM rbh
Phosphate transporter {ECO:0000313|EMBL:EFG24080.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
phosphate transporter
NECEvent2014_3_2_scaffold_0_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23527..23700
DNA (174bp) protein (58aa)
Uncharacterized protein n=5 Tax=Veillonella RepID=D1BNS3_VEIPT
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EGL77616.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ACS-068-
NECEvent2014_3_2_scaffold_0_18
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23944..24948)
DNA (1005bp) protein (335aa)
Periplasmic binding protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQY3_9FIRM rbh
Periplasmic binding protein {ECO:0000313|EMBL:EFB85543.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC
periplasmic binding protein
NECEvent2014_3_2_scaffold_0_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24970..25716)
DNA (747bp) protein (249aa)
ABC transporter, ATP-binding protein n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQY2_9FIRM rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFB85542.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parv
ABC transporter
NECEvent2014_3_2_scaffold_0_20
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25743..26750)
DNA (1008bp) protein (336aa)
Iron chelate uptake ABC transporter, FeCT family, permease protein n=1 Tax=Veillonella parvula ACS-068-V-Sch12 RepID=F5L2W9_9FIRM rbh
Iron chelate uptake ABC transporter, FeCT family, permease protein {ECO:0000313|EMBL:EGL76485.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonel
transporter permease
NECEvent2014_3_2_scaffold_0_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27002..27457
DNA (456bp) protein (152aa)
PTS system,3-keto-L-gulonate/L-ascorbatespecific IIA component(PtxA) n=1 Tax=Veillonella parvula HSIVP1 RepID=T0T478_9FIRM rbh
PTS system,3-keto-L-gulonate/L-ascorbatespecific IIA component(PtxA) {ECO:0000313|EMBL:EQC66056.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillo
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
NECEvent2014_3_2_scaffold_0_22
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27478..27753
DNA (276bp) protein (92aa)
Phosphotransferase system lactose/cellobiose-specific IIB subunit n=3 Tax=Veillonella RepID=D1BNR8_VEIPT
PTS system lactose/cellobiose-specific transporter subunit IIB
PTS system, Lactose/Cellobiose specific IIB subunit {ECO:0000313|EMBL:EFB85539.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="V
NECEvent2014_3_2_scaffold_0_23
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27785..29152
DNA (1368bp) protein (456aa)
Putative sugar-specific permease SgaT/UlaA n=2 Tax=Veillonella parvula RepID=D1BNR7_VEIPT rbh
Putative sugar-specific permease, SgaT/UlaA {ECO:0000313|EMBL:EFB85538.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
sugar-specific permease SgaT/UlaA
NECEvent2014_3_2_scaffold_0_24
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29152..29547
DNA (396bp) protein (132aa)
Putative membrane protein n=1 Tax=Veillonella sp. 3_1_44 RepID=D6KIX8_9FIRM
Putative membrane protein {ECO:0000313|EMBL:EFG24075.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_44.;"
hypothetical protein
NECEvent2014_3_2_scaffold_0_25
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

29805..30695
DNA (891bp) protein (297aa)
UPI0003D63A7A related cluster n=1 Tax=unknown RepID=UPI0003D63A7A rbh
Transcriptional regulator, AraC family {ECO:0000313|EMBL:ETI98848.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella d
AraC family transcriptional regulator
NECEvent2014_3_2_scaffold_0_26
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

30928..35949
DNA (5022bp) protein (1674aa)
Putative TonB-dependent receptor n=2 Tax=Veillonella sp. 3_1_44 RepID=D6KIX6_9FIRM rbh
Putative TonB-dependent receptor {ECO:0000313|EMBL:EFG24073.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
TonB-dependent receptor plug
NECEvent2014_3_2_scaffold_0_27
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

36135..41213
DNA (5079bp) protein (1693aa)
UPI0003D5EA18 related cluster n=1 Tax=unknown RepID=UPI0003D5EA18 rbh
TonB-dependent receptor plug domain protein {ECO:0000313|EMBL:EFB85534.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
TonB-dependent receptor plug
Displaying items 1-30 of 784 in total

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