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NECEvent2014_3_2_scaffold_5

Alias: 173_006_scaffold_5

Search features with annotation key words

Displaying items 1-30 of 384 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_5_1
Alicyclobacillus acidocaldarius, Alicyclobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Bacteroides clarus YIT 12056 RepID=F3PJC5_9BACE
tuf2; elongation factor Tu
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1048834 species="Bacteria; Firmicutes; Bacilli; Bacillales;
NECEvent2014_3_2_scaffold_5_trna_10
unknown

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comp(282..355)
DNA (74bp)
transferRNA
NECEvent2014_3_2_scaffold_5_trna_9
unknown

Not on your lists

comp(364..436)
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_5_trna_8
unknown

Not on your lists

comp(471..543)
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_5_trna_7
unknown

Not on your lists

comp(552..633)
DNA (82bp)
transferRNA
NECEvent2014_3_2_scaffold_5_trna_6
unknown

Not on your lists

comp(647..719)
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_5_2
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1165..1629)
DNA (465bp) protein (155aa)
Uncharacterized protein n=6 Tax=Veillonella RepID=D1BP84_VEIPT rbh
hypothetical protein
Putative uncharacterized protein {ECO:0000313|EMBL:EFG23229.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
NECEvent2014_3_2_scaffold_5_3
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(1658..3079)
DNA (1422bp) protein (474aa)
Putative uncharacterized protein n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQI5_9FIRM rbh
Putative uncharacterized protein {ECO:0000313|EMBL:EFG25033.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_1_
hypothetical protein
NECEvent2014_3_2_scaffold_5_4
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3076..3729)
DNA (654bp) protein (218aa)
Hydrogenase accessory protein HypB n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQI4_9FIRM rbh
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EFG25032.2}; TaxID=450749 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 6_
hydrogenase nickel incorporation protein HypB
NECEvent2014_3_2_scaffold_5_5
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(3745..4086)
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA n=2 Tax=Veillonella RepID=T0SUR5_9FIRM
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" s
hydrogenase nickel incorporation protein HypA
NECEvent2014_3_2_scaffold_5_6
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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comp(4079..4906)
DNA (828bp) protein (276aa)
Bifunctional protein FolD n=1 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBN9_9FIRM rbh
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. oral ta
tetrahydrofolate dehydrogenase/cyclohydrolase
NECEvent2014_3_2_scaffold_5_7
Veillonella sp. oral taxon 158, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(5025..6992)
DNA (1968bp) protein (656aa)
Penicillin-binding protein, transpeptidase domain protein n=2 Tax=Veillonella sp. oral taxon 158 str. F0412 RepID=E4LBP0_9FIRM rbh
Penicillin-binding protein, transpeptidase domain protein {ECO:0000313|EMBL:EFR60917.1}; TaxID=879309 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" sou
penicillin-binding protein transpeptidase
NECEvent2014_3_2_scaffold_5_8
Veillonella sp. DORA_A_3_16_22, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6992..8410)
DNA (1419bp) protein (473aa)
UPI0003D66B2A related cluster n=1 Tax=unknown RepID=UPI0003D66B2A rbh
CCA-adding enzyme {ECO:0000313|EMBL:ETJ14218.1}; TaxID=1403932 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. DORA_A_3_16_22.;"
polynucleotide adenylyltransferase/metal dependent phosphohydrolase
NECEvent2014_3_2_scaffold_5_9
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(8479..9351)
DNA (873bp) protein (291aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit {ECO:0000313|EMBL:EEP66354.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEP66354.1};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenom
L-serine dehydratase, iron-sulfur-dependent, alpha subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FN96_9FIRM rbh
L-serine dehydratase, iron-sulfur-dependent subunit alpha
NECEvent2014_3_2_scaffold_5_10
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(9363..10025)
DNA (663bp) protein (221aa)
L-serine dehydratase, iron-sulfur-dependent, beta subunit {ECO:0000313|EMBL:EEP66353.1}; EC=4.3.1.17 {ECO:0000313|EMBL:EEP66353.1};; TaxID=546273 species="Bacteria; Firmicutes; Negativicutes; Selenomo
L-serine dehydratase, iron-sulfur-dependent, beta subunit n=1 Tax=Veillonella dispar ATCC 17748 RepID=C4FN95_9FIRM rbh
L-serine dehydratase, iron-sulfur-dependent subunit beta
NECEvent2014_3_2_scaffold_5_11
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10463..12028)
DNA (1566bp) protein (522aa)
Hydroxylamine reductase {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00038686}; EC=1.7.99.1 {ECO:0000256|HAMAP-Rule:MF_00069, ECO:0000256|SAAS:SAAS00150119};; Hybrid-cluster protein {ECO:000
Hydroxylamine reductase n=2 Tax=Veillonella parvula RepID=D1YQ46_9FIRM rbh
hybrid cluster protein
NECEvent2014_3_2_scaffold_5_12
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12301..13026
DNA (726bp) protein (242aa)
Transcriptional regulator, Crp/Fnr family n=3 Tax=Veillonella RepID=T0T254_9FIRM rbh
Transcriptional regulator, Crp/Fnr family {ECO:0000313|EMBL:EQC65092.1}; TaxID=1316254 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonell
Crp/Fnr family transcriptional regulator
NECEvent2014_3_2_scaffold_5_13
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(13183..14946)
DNA (1764bp) protein (588aa)
UPI0003D692DA related cluster n=1 Tax=unknown RepID=UPI0003D692DA rbh
Uncharacterized protein {ECO:0000313|EMBL:ETJ02264.1}; TaxID=1403949 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella dispar DORA_11.;
hypothetical protein
NECEvent2014_3_2_scaffold_5_14
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(14956..15507)
DNA (552bp) protein (184aa)
UPF0340 protein HMPREF1035_0870 n=1 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ43_9FIRM rbh
UPF0340 protein HMPREF1035_0870 {ECO:0000256|HAMAP-Rule:MF_00800}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvu
hypothetical protein
NECEvent2014_3_2_scaffold_5_15
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(15679..16239)
DNA (561bp) protein (187aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit n=6 Tax=Veillonella RepID=D1BP97_VEIPT rbh
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit beta rbh
Fumarate hydratase, beta subunit {ECO:0000313|EMBL:EFG23216.2}; TaxID=457416 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. 3_1_
NECEvent2014_3_2_scaffold_5_16
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(16259..17101)
DNA (843bp) protein (281aa)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, alpha subunit n=6 Tax=Veillonella RepID=D1BP98_VEIPT rbh
hydro-lyase, Fe-S type, tartrate/fumarate subfamily, subunit alpha
Hydrolyase, tartrate alpha subunit/fumarate domain protein, Fe-S type {ECO:0000313|EMBL:EGL77665.1}; TaxID=768727 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillo
NECEvent2014_3_2_scaffold_5_trna_1
unknown

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17842..17914
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_5_trna_2
unknown

Not on your lists

17922..17993
DNA (72bp)
transferRNA
NECEvent2014_3_2_scaffold_5_trna_3
unknown

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18001..18073
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_5_17
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

18186..19094
DNA (909bp) protein (303aa)
Uncharacterized protein n=2 Tax=Veillonella parvula ATCC 17745 RepID=D1YQ40_9FIRM rbh
Uncharacterized protein {ECO:0000313|EMBL:EFB86181.1}; TaxID=686660 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella parvula ATCC 1774
hypothetical protein
NECEvent2014_3_2_scaffold_5_18
Veillonella sp. 6_1_27, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19141..19548)
DNA (408bp) protein (136aa)
ATP synthase epsilon chain n=1 Tax=Veillonella sp. 6_1_27 RepID=D6KQH2_9FIRM
ATP synthase epsilon chain {ECO:0000256|HAMAP-Rule:MF_00530}; ATP synthase F1 sector epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; F-ATPase epsilon subunit {ECO:0000256|HAMAP-Rule:MF_00530}; TaxI
ATP synthase F1 subunit epsilon
NECEvent2014_3_2_scaffold_5_19
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(19552..20976)
DNA (1425bp) protein (475aa)
ATP synthase subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01347};; ATP synthase F1 sector subunit beta {ECO:0000256|HAMAP-Rule:MF_01347}; F-ATPase subunit bet
ATP synthase subunit beta n=3 Tax=Veillonella RepID=D1YQ38_9FIRM rbh
ATP synthase F1 subunit beta
NECEvent2014_3_2_scaffold_5_20
Veillonella sp. 3_1_44, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(20995..21849)
DNA (855bp) protein (285aa)
ATP synthase gamma chain n=4 Tax=Veillonella RepID=D6KK02_9FIRM rbh
ATP synthase gamma chain {ECO:0000256|HAMAP-Rule:MF_00815}; ATP synthase F1 sector gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; F-ATPase gamma subunit {ECO:0000256|HAMAP-Rule:MF_00815}; TaxID=4574
ATP synthase F1 subunit gamma
NECEvent2014_3_2_scaffold_5_21
Veillonella parvula, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(21853..23391)
DNA (1539bp) protein (513aa)
ATP synthase subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; EC=3.6.3.14 {ECO:0000256|HAMAP-Rule:MF_01346};; ATP synthase F1 sector subunit alpha {ECO:0000256|HAMAP-Rule:MF_01346}; F-ATPase subunit a
ATP synthase subunit alpha n=3 Tax=Veillonella RepID=T0T1T3_9FIRM rbh
ATP synthase F1 subunit alpha
NECEvent2014_3_2_scaffold_5_22
Veillonella dispar, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(23408..23959)
DNA (552bp) protein (184aa)
ATP synthase subunit delta n=4 Tax=Veillonella RepID=D6KK00_9FIRM rbh
ATP synthase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; ATP synthase F(1) sector subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; F-type ATPase subunit delta {ECO:0000256|HAMAP-Rule:MF_01416}; T
ATP synthase F1 subunit delta
Displaying items 1-30 of 384 in total

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