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NECEvent2014_3_2_scaffold_542

Alias: 173_006_scaffold_542

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Displaying 6 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_542_1
Clostridium sp., Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..98)
DNA (96bp) protein (32aa)
Elongation factor Tu n=1 Tax=Enterorhabdus caecimuris B7 RepID=R9L468_9ACTN
tuf; elongation factor Tu
Uncharacterized protein {ECO:0000313|EMBL:CAO85688.1}; Flags: Fragment;; TaxID=1506 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp.;"
NECEvent2014_3_2_scaffold_542_trna_1
unknown

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comp(162..234)
DNA (73bp)
transferRNA
NECEvent2014_3_2_scaffold_542_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(312..932)
DNA (621bp) protein (207aa)
RNA polymerase sigma-H factor n=3 Tax=Clostridium butyricum RepID=C4IF71_CLOBU rbh
RNA polymerase sigma-H factor {ECO:0000313|EMBL:EEP55192.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str.
sigH; RNA polymerase sigma-H factor SigH
NECEvent2014_3_2_scaffold_542_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1020..1532)
DNA (513bp) protein (171aa)
Tetracycline resistance protein n=2 Tax=Clostridium butyricum RepID=M8K1R4_CLOBU rbh
Uncharacterized protein {ECO:0000313|EMBL:KJZ87855.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_3_2_scaffold_542_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1543..2376)
DNA (834bp) protein (278aa)
23S rRNA (Guanosine-2'-O-)-methyltransferase rlmB {ECO:0000313|EMBL:KJZ87842.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJZ87842.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
RNA methyltransferase, TrmH family, group 3 n=2 Tax=Clostridium butyricum RepID=M8JF23_CLOBU rbh
RNA methyltransferase
NECEvent2014_3_2_scaffold_542_5
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2407..2820)
DNA (414bp) protein (138aa)
Mini-ribonuclease 3 {ECO:0000256|HAMAP-Rule:MF_01468}; Short=Mini-3 {ECO:0000256|HAMAP-Rule:MF_01468};; Short=Mini-RNase 3 {ECO:0000256|HAMAP-Rule:MF_01468};; EC=3.1.26.- {ECO:0000256|HAMAP-Rule:MF_01
mrnC; mini-ribonuclease 3 (EC:3.1.26.-)
Mini-ribonuclease 3 n=2 Tax=Clostridium butyricum RepID=M8JGD9_CLOBU
Displaying 6 items

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