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NECEvent2014_3_2_Clostridium_butyricum_31_11

NECEvent2014_3_2_Clostridium_31_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Displaying items 1-50 of 1098 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_1704 173_006_scaffold_1704
Species: Clostridium sp. IBUN13A (100%)
1 1376 bp 27.40 2.62 99.85
NECEvent2014_3_2_scaffold_2245 173_006_scaffold_2245
Species: Clostridium butyricum (50%)
2 1112 bp 28.87 2.83 65.02
NECEvent2014_3_2_scaffold_2477 173_006_scaffold_2477
Species: Clostridium sp. IBUN13A (50%)
2 1029 bp 27.60 2.92 96.50
NECEvent2014_3_2_scaffold_1937 173_006_scaffold_1937
Species: Clostridium sp. IBUN13A (50%)
2 1236 bp 27.67 3.16 88.11
NECEvent2014_3_2_scaffold_1958 173_006_scaffold_1958
Species: Clostridium butyricum (100%)
1 1231 bp 26.32 3.17 99.92
NECEvent2014_3_2_scaffold_2321 173_006_scaffold_2321
Species: Clostridium butyricum (50%)
2 1088 bp 26.38 3.31 88.24
NECEvent2014_3_2_scaffold_2351 173_006_scaffold_2351
Species: Clostridium sp. IBUN125C (50%)
2 1081 bp 29.14 3.33 90.75
NECEvent2014_3_2_scaffold_1893 173_006_scaffold_1893
Species: Clostridium butyricum (100%)
2 1257 bp 25.93 3.34 89.50
NECEvent2014_3_2_scaffold_1399 173_006_scaffold_1399
Species: Clostridium sp. IBUN125C (50%)
2 1589 bp 27.63 3.40 73.25
NECEvent2014_3_2_scaffold_2284 173_006_scaffold_2284
Species: Clostridium butyricum (50%)
2 1098 bp 27.96 3.55 93.44
NECEvent2014_3_2_scaffold_2063 173_006_scaffold_2063
Species: Clostridium butyricum (100%)
1 1180 bp 26.10 3.56 97.12
NECEvent2014_3_2_scaffold_1889 173_006_scaffold_1889
Species: Clostridium butyricum (100%)
1 1258 bp 27.98 3.58 99.92
NECEvent2014_3_2_scaffold_1332 173_006_scaffold_1332
Species: Clostridium sp. IBUN125C (66.67%)
3 1643 bp 27.75 3.65 97.14
NECEvent2014_3_2_scaffold_2394 173_006_scaffold_2394
Species: Clostridium sp. IBUN125C (100%)
2 1064 bp 26.41 3.67 82.05
NECEvent2014_3_2_scaffold_1349 173_006_scaffold_1349
Species: Clostridium sp. IBUN125C (50%)
2 1632 bp 25.86 3.68 79.04
NECEvent2014_3_2_scaffold_2009 173_006_scaffold_2009
Species: Clostridium butyricum (50%)
2 1205 bp 28.96 3.73 102.08
NECEvent2014_3_2_scaffold_2213 173_006_scaffold_2213
Species: Clostridium sp. IBUN125C (50%)
2 1122 bp 26.38 3.74 63.64
NECEvent2014_3_2_scaffold_2476 173_006_scaffold_2476
Species: Clostridium sp. IBUN125C (100%)
1 1029 bp 28.77 3.79 90.38
NECEvent2014_3_2_scaffold_2399 173_006_scaffold_2399
Species: Clostridium sp. IBUN125C (100%)
1 1059 bp 30.03 3.82 84.42
NECEvent2014_3_2_scaffold_2568 173_006_scaffold_2568
Species: Clostridium sp. IBUN125C (50%)
2 1000 bp 27.10 3.90 45.90
NECEvent2014_3_2_scaffold_1400 173_006_scaffold_1400
Species: Clostridium sp. IBUN125C (50%)
2 1588 bp 27.52 3.97 83.50
NECEvent2014_3_2_scaffold_2186 173_006_scaffold_2186
Species: Clostridium butyricum (66.67%)
3 1132 bp 28.98 3.98 73.41
NECEvent2014_3_2_scaffold_1160 173_006_scaffold_1160
Species: Clostridium sp. IBUN125C (100%)
2 1809 bp 27.31 3.98 99.17
NECEvent2014_3_2_scaffold_1735 173_006_scaffold_1735
Species: Clostridium sp. IBUN13A (50%)
2 1354 bp 26.44 3.99 97.93
NECEvent2014_3_2_scaffold_2034 173_006_scaffold_2034
Species: Clostridium sp. IBUN13A (100%)
2 1196 bp 23.66 4.01 99.33
NECEvent2014_3_2_scaffold_2432 173_006_scaffold_2432
Species: Clostridium butyricum (100%)
2 1046 bp 25.53 4.02 72.28
NECEvent2014_3_2_scaffold_1466 173_006_scaffold_1466
Species: Clostridium butyricum (100%)
2 1532 bp 28.39 4.11 85.57
NECEvent2014_3_2_scaffold_2112 173_006_scaffold_2112
Species: Clostridium butyricum (100%)
2 1161 bp 29.29 4.13 58.91
NECEvent2014_3_2_scaffold_1817 173_006_scaffold_1817
Species: Clostridium sp. IBUN13A (50%)
2 1299 bp 28.33 4.16 86.37
NECEvent2014_3_2_scaffold_2528 173_006_scaffold_2528
Species: Clostridium sp. IBUN125C (100%)
1 1009 bp 28.15 4.16 99.90
NECEvent2014_3_2_scaffold_2539 173_006_scaffold_2539
Species: Clostridium butyricum (100%)
1 1008 bp 28.37 4.17 99.70
NECEvent2014_3_2_scaffold_1222 173_006_scaffold_1222
Species: Clostridium sp. IBUN125C (100%)
1 1748 bp 28.95 4.20 90.79
NECEvent2014_3_2_scaffold_2166 173_006_scaffold_2166
Species: Clostridium sp. IBUN125C (100%)
1 1139 bp 26.25 4.21 99.82
NECEvent2014_3_2_scaffold_1742 173_006_scaffold_1742
Species: Clostridium butyricum (100%)
1 1348 bp 27.30 4.23 99.93
NECEvent2014_3_2_scaffold_1443 173_006_scaffold_1443
Species: Clostridium butyricum (100%)
3 1548 bp 28.68 4.26 84.69
NECEvent2014_3_2_scaffold_1462 173_006_scaffold_1462
Species: Clostridium sp. IBUN125C (50%)
2 1535 bp 28.66 4.30 85.60
NECEvent2014_3_2_scaffold_2049 173_006_scaffold_2049
Species: Clostridium sp. IBUN125C (100%)
1 1187 bp 28.14 4.30 86.44
NECEvent2014_3_2_scaffold_2146 173_006_scaffold_2146
Species: Clostridium butyricum (66.67%)
3 1149 bp 29.33 4.31 83.03
NECEvent2014_3_2_scaffold_2057 173_006_scaffold_2057
Species: Clostridium sp. IBUN125C (100%)
1 1183 bp 30.52 4.31 59.59
NECEvent2014_3_2_scaffold_1781 173_006_scaffold_1781
Species: Clostridium butyricum (100%)
1 1321 bp 26.95 4.31 99.70
NECEvent2014_3_2_scaffold_941 173_006_scaffold_941
Species: Clostridium sp. IBUN125C (50%)
2 2075 bp 28.29 4.34 98.02
NECEvent2014_3_2_scaffold_2287 173_006_scaffold_2287
Species: Clostridium sp. IBUN13A (100%)
1 1098 bp 27.32 4.37 86.61
NECEvent2014_3_2_scaffold_1498 173_006_scaffold_1498
Genus: Clostridium (66.67%)
3 1510 bp 26.69 4.37 83.64
NECEvent2014_3_2_scaffold_1819 173_006_scaffold_1819
Species: Clostridium butyricum (100%)
1 1298 bp 27.81 4.39 99.38
NECEvent2014_3_2_scaffold_2487 173_006_scaffold_2487
Species: Clostridium butyricum (100%)
1 1026 bp 29.92 4.39 91.81
NECEvent2014_3_2_scaffold_1511 173_006_scaffold_1511
Species: Clostridium butyricum (100%)
1 1501 bp 27.98 4.40 91.74
NECEvent2014_3_2_scaffold_2316 173_006_scaffold_2316
Species: Clostridium sp. IBUN13A (50%)
2 1090 bp 28.35 4.40 100.18
NECEvent2014_3_2_scaffold_2318 173_006_scaffold_2318
Species: Clostridium sp. IBUN125C (100%)
1 1089 bp 29.48 4.41 99.72
NECEvent2014_3_2_scaffold_2501 173_006_scaffold_2501
Species: Clostridium sp. IBUN125C (100%)
1 1018 bp 29.67 4.42 94.01
NECEvent2014_3_2_scaffold_885 173_006_scaffold_885
Species: Clostridium sp. IBUN125C (66.67%)
3 2157 bp 29.25 4.45 91.52
Displaying items 1-50 of 1098 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.