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NECEvent2014_3_2_scaffold_79

Alias: 173_006_scaffold_79

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Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_2_scaffold_79_1
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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109..1098
DNA (990bp) protein (330aa)
AraC-type DNA-binding domain-containing protein n=1 Tax=Clostridium termitidis CT1112 RepID=S0FY69_9CLOT rbh
AraC-type DNA-binding domain-containing protein {ECO:0000313|EMBL:EMS73533.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Cl
transcriptional regulator with only HTH domain, AraC family
NECEvent2014_3_2_scaffold_79_2
[Clostridium] asparagiforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1224..2180
DNA (957bp) protein (319aa)
ABC transporter, permease protein n=1 Tax=Clostridium asparagiforme DSM 15981 RepID=C0D2G7_9CLOT rbh
ABC transporter, permease protein {ECO:0000313|EMBL:EEG54473.1}; TaxID=518636 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium asparagiforme] DSM 15981
binding-protein-dependent transporters inner membrane component
NECEvent2014_3_2_scaffold_79_3
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2177..2977
DNA (801bp) protein (267aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Syntrophobotulus glycolicus (strain DSM 8271 / FlGlyR) RepID=F0T2M3_SYNGF rbh
Uncharacterized protein {ECO:0000313|EMBL:KGF55544.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
binding-protein-dependent transporters inner membrane component
NECEvent2014_3_2_scaffold_79_4
Flavonifractor plautii, Flavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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2970..3761
DNA (792bp) protein (264aa)
nickel-transporting ATPase (EC:3.6.3.24)
ABC transporter, ATP-binding protein n=1 Tax=Eubacterium hallii DSM 3353 RepID=C0EST0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGF55566.1}; TaxID=742738 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Flavonifractor.;" source="Clostridium orbiscindens 1_3_50AFAA.;"
NECEvent2014_3_2_scaffold_79_5
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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3746..4468
DNA (723bp) protein (241aa)
Fe(3+)-transporting ATPase (EC:3.6.3.30)
ABC transporter, ATP-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWH6_9FIRM
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EDM99513.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source="Pseudoflavonifractor capillos
NECEvent2014_3_2_scaffold_79_6
Pseudoflavonifractor capillosus, Pseudoflavonifractor, Clostridiales, Clostridia, Firmicutes, Bacteria

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4465..6081
DNA (1617bp) protein (539aa)
Putative nickel ABC transporter, periplasmic nickel-binding protein n=1 Tax=Pseudoflavonifractor capillosus ATCC 29799 RepID=A6NWH7_9FIRM rbh
Putative nickel ABC transporter, periplasmic nickel-binding protein {ECO:0000313|EMBL:EDM99514.1}; TaxID=411467 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pseudoflavonifractor.;" source
family 5 extracellular solute-binding protein
NECEvent2014_3_2_scaffold_79_7
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6202..8019
DNA (1818bp) protein (606aa)
ABC transporter n=1 Tax=Clostridium termitidis CT1112 RepID=S0FNR6_9CLOT rbh
ABC transporter {ECO:0000313|EMBL:EMS73542.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ABC transporter related protein
NECEvent2014_3_2_scaffold_79_8
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8016..9746
DNA (1731bp) protein (577aa)
ABC transporter n=1 Tax=Clostridium termitidis CT1112 RepID=S0FY10_9CLOT rbh
ABC transporter {ECO:0000313|EMBL:EMS73468.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT1112.;"
ABC transporter ATP-binding protein
NECEvent2014_3_2_scaffold_79_9
Enterococcus malodoratus, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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comp(9952..10899)
DNA (948bp) protein (316aa)
Uncharacterized protein n=1 Tax=Enterococcus malodoratus ATCC 43197 RepID=R2NQJ8_9ENTE rbh
Uncharacterized protein {ECO:0000313|EMBL:EOH74307.1}; TaxID=1158601 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus malodoratus ATCC 431
alpha/beta hydrolase fold protein
NECEvent2014_3_2_scaffold_79_10
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10892..11527)
DNA (636bp) protein (212aa)
TetR family transcriptional regulator n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7HY96_9CLOT
TetR family transcriptional regulator {ECO:0000313|EMBL:ETA78950.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragi
TetR family transcriptional regulator
NECEvent2014_3_2_scaffold_79_11
Syntrophaceticus schinkii, Syntrophaceticus, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

11763..12122
DNA (360bp) protein (120aa)
Putative transcriptional regulator n=1 Tax=Desulfitobacterium dehalogenans (strain ATCC 51507 / DSM 9161 / JW/IU-DC1) RepID=I4A8H0_DESDJ
Transcriptional repressor, CopY family {ECO:0000313|EMBL:CEO88784.1}; TaxID=499207 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis;
transcriptional regulator
NECEvent2014_3_2_scaffold_79_12
Syntrophomonas zehnderi, Syntrophomonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12119..13033
DNA (915bp) protein (305aa)
Antirepressor regulating drug resistance protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8M008_CLOCD rbh
Peptidase M56, BlaR1 {ECO:0000313|EMBL:CFX89816.1}; TaxID=690567 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Syntrophomonas.;" source="Syntrophomonas zehnderi OL-4.;
antirepressor regulating drug resistance protein
Displaying 12 items

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