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NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

NECEvent2014_3_2_Clostridium_33_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_3_2_UNK

Properties

Avg. coverage: 10.96 Longest contig: 17.14 Kbp Bin length: 2.31 Mbp GC content: 32.67 %
Contigs count: 942 Features count: 2626 rRNAs count: 0 tRNAs count: 8

Genome completeness

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4

Description

Novel genotype. some may be in Unk.

Displaying items 601-650 of 942 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_1441 173_006_scaffold_1441
Species: Helcococcus kunzii (50%)
2 1549 bp 31.05 6.97 74.56
NECEvent2014_3_2_scaffold_2499 173_006_scaffold_2499
Species: Dethiobacter alkaliphilus (100%)
2 1021 bp 31.83 5.00 100.49
NECEvent2014_3_2_scaffold_1186 173_006_scaffold_1186
Species: Blautia sp. CAG:52 (50%)
2 1785 bp 32.83 10.25 88.07
NECEvent2014_3_2_scaffold_477 173_006_scaffold_477
Species: Clostridium novyi (50%)
2 3113 bp 29.52 5.59 93.38
NECEvent2014_3_2_scaffold_733 173_006_scaffold_733
Species: Alkaliphilus metalliredigens (50%)
2 2397 bp 31.41 8.89 91.11
NECEvent2014_3_2_scaffold_1956 173_006_scaffold_1956
Species: Alkaliphilus oremlandii (100%)
2 1231 bp 30.71 5.85 93.83
NECEvent2014_3_2_scaffold_734 173_006_scaffold_734
Species: Clostridium intestinale (50%)
2 2395 bp 30.10 8.52 90.31
NECEvent2014_3_2_scaffold_990 173_006_scaffold_990
Species: Clostridium ultunense (100%)
2 2000 bp 32.60 7.35 93.00
NECEvent2014_3_2_scaffold_1957 173_006_scaffold_1957
Species: Clostridium ultunense (50%)
2 1231 bp 34.28 15.84 89.20
NECEvent2014_3_2_scaffold_1702 173_006_scaffold_1702
Species: BJP_IG2069_Clostridiales_48_15 (50%)
2 1376 bp 30.45 5.67 95.06
NECEvent2014_3_2_scaffold_736 173_006_scaffold_736
Species: Clostridium sp. IBUN22A (50%)
2 2390 bp 28.12 4.77 92.76
NECEvent2014_3_2_scaffold_992 173_006_scaffold_992
Species: Clostridium ultunense (50%)
2 1997 bp 31.50 9.54 85.03
NECEvent2014_3_2_scaffold_481 173_006_scaffold_481
Species: Firmicutes bacterium CAG:145 (50%)
2 3102 bp 34.43 12.28 95.55
NECEvent2014_3_2_scaffold_1960 173_006_scaffold_1960
Species: Clostridium argentinense (50%)
2 1229 bp 31.57 4.64 93.73
NECEvent2014_3_2_scaffold_1449 173_006_scaffold_1449
Species: Clostridium ultunense (100%)
2 1543 bp 29.23 5.83 94.49
NECEvent2014_3_2_scaffold_995 173_006_scaffold_995
Species: Caloranaerobacter azorensis (50%)
2 1993 bp 31.96 6.77 99.80
NECEvent2014_3_2_scaffold_1194 173_006_scaffold_1194
Species: Clostridium ultunense (100%)
2 1774 bp 32.36 6.26 91.83
NECEvent2014_3_2_scaffold_998 173_006_scaffold_998
Species: Anaerococcus prevotii (50%)
2 1992 bp 33.84 15.36 97.59
NECEvent2014_3_2_scaffold_1709 173_006_scaffold_1709
Species: Clostridium ultunense (100%)
2 1370 bp 30.66 6.57 81.68
NECEvent2014_3_2_scaffold_1965 173_006_scaffold_1965
Species: Clostridium ultunense (50%)
2 1227 bp 29.75 5.13 95.11
NECEvent2014_3_2_scaffold_2255 173_006_scaffold_2255
Species: Clostridium ultunense (50%)
2 1108 bp 30.14 4.33 95.85
NECEvent2014_3_2_scaffold_2256 173_006_scaffold_2256
Species: Clostridium ultunense (100%)
2 1108 bp 31.95 27.89 98.56
NECEvent2014_3_2_scaffold_1967 173_006_scaffold_1967
Species: Clostridium ultunense (100%)
2 1225 bp 32.00 4.16 100.16
NECEvent2014_3_2_scaffold_490 173_006_scaffold_490
Species: Thermincola potens (50%)
2 3073 bp 30.95 5.96 80.54
NECEvent2014_3_2_scaffold_2258 173_006_scaffold_2258
Species: Clostridium botulinum (50%)
2 1108 bp 27.71 5.14 63.90
NECEvent2014_3_2_scaffold_1457 173_006_scaffold_1457
Species: BJP_IG2157_Clostridiales_35_16 (50%)
2 1538 bp 32.44 5.07 98.70
NECEvent2014_3_2_scaffold_1969 173_006_scaffold_1969
Species: Ruminiclostridium thermocellum (50%)
2 1224 bp 33.17 9.07 99.51
NECEvent2014_3_2_scaffold_2004 173_006_scaffold_2004
Species: Clostridium ultunense (100%)
2 1207 bp 32.39 10.07 98.43
NECEvent2014_3_2_scaffold_2006 173_006_scaffold_2006
Species: Clostridium perfringens (100%)
2 1206 bp 29.77 7.21 98.76
NECEvent2014_3_2_scaffold_2007 173_006_scaffold_2007
Species: Peptoniphilus sp. BV3C26 (50%)
2 1206 bp 27.61 4.98 84.58
NECEvent2014_3_2_scaffold_2264 173_006_scaffold_2264
Species: Clostridium sp. IBUN13A (50%)
2 1105 bp 28.33 4.07 66.79
NECEvent2014_3_2_scaffold_1465 173_006_scaffold_1465
Species: Clostridium saccharoperbutylacetonicum (50%)
2 1533 bp 32.42 7.44 99.02
NECEvent2014_3_2_scaffold_2267 173_006_scaffold_2267
Species: Paenibacillus sp. FSL H8-237 (50%)
2 1104 bp 31.34 5.16 77.17
NECEvent2014_3_2_scaffold_1978 173_006_scaffold_1978
Species: Caldisalinibacter kiritimatiensis (50%)
2 1221 bp 29.48 5.41 95.82
NECEvent2014_3_2_scaffold_244 173_006_scaffold_244
Species: Clostridium ultunense (50%)
2 4457 bp 32.58 10.87 96.46
NECEvent2014_3_2_scaffold_2268 173_006_scaffold_2268
Species: Desulfotomaculum ruminis (50%)
2 1104 bp 32.07 10.05 85.33
NECEvent2014_3_2_scaffold_1467 173_006_scaffold_1467
Species: Peptostreptococcaceae bacterium oral taxon 113 (50%)
2 1532 bp 34.66 12.34 69.91
NECEvent2014_3_2_scaffold_1212 173_006_scaffold_1212
Species: Alkaliphilus metalliredigens (50%)
2 1756 bp 32.35 9.23 89.18
NECEvent2014_3_2_scaffold_758 173_006_scaffold_758
Species: Clostridium ultunense (100%)
2 2347 bp 34.60 15.02 96.38
NECEvent2014_3_2_scaffold_2270 173_006_scaffold_2270
Species: Clostridiales bacterium oral taxon 876 (50%)
2 1103 bp 33.18 13.19 99.00
NECEvent2014_3_2_scaffold_2526 173_006_scaffold_2526
Species: Clostridium sporogenes (50%)
2 1010 bp 28.22 3.27 79.60
NECEvent2014_3_2_scaffold_1469 173_006_scaffold_1469
Species: Clostridium ultunense (50%)
2 1532 bp 32.11 12.14 84.79
NECEvent2014_3_2_scaffold_248 173_006_scaffold_248
Species: Desulfotomaculum gibsoniae (50%)
2 4418 bp 32.10 12.70 92.69
NECEvent2014_3_2_scaffold_1216 173_006_scaffold_1216
Species: Caldisalinibacter kiritimatiensis (50%)
2 1752 bp 32.82 12.50 84.93
NECEvent2014_3_2_scaffold_1472 173_006_scaffold_1472
Species: Clostridium ultunense (100%)
2 1531 bp 32.53 6.47 97.19
NECEvent2014_3_2_scaffold_506 173_006_scaffold_506
Species: Alkaliphilus oremlandii (50%)
2 3023 bp 34.01 12.11 91.30
NECEvent2014_3_2_scaffold_2532 173_006_scaffold_2532
Species: Clostridium cellulovorans (50%)
2 1009 bp 28.05 7.14 98.71
NECEvent2014_3_2_scaffold_253 173_006_scaffold_253
Species: Clostridium carboxidivorans (50%)
2 4383 bp 32.44 9.72 96.24
NECEvent2014_3_2_scaffold_2533 173_006_scaffold_2533
Species: Clostridium ultunense (50%)
2 1009 bp 32.11 3.72 91.58
NECEvent2014_3_2_scaffold_1988 173_006_scaffold_1988
Species: Clostridium ultunense (50%)
2 1215 bp 32.43 7.28 89.63
Displaying items 601-650 of 942 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.