ggKbase home page
Advanced Search
Search Help

NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

NECEvent2014_3_2_Clostridium_33_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_3_2_UNK

Properties

Avg. coverage: 10.96 Longest contig: 17.14 Kbp Bin length: 2.31 Mbp GC content: 32.67 %
Contigs count: 942 Features count: 2626 rRNAs count: 0 tRNAs count: 8

Genome completeness

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4

Description

Novel genotype. some may be in Unk.

Displaying items 651-700 of 942 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_2534 173_006_scaffold_2534
Species: Clostridium ultunense (100%)
2 1009 bp 33.30 12.19 100.79
NECEvent2014_3_2_scaffold_511 173_006_scaffold_511
Species: Clostridium leptum CAG:27 (50%)
2 2991 bp 33.33 9.23 99.40
NECEvent2014_3_2_scaffold_2279 173_006_scaffold_2279
Species: Caldisalinibacter kiritimatiensis (100%)
2 1100 bp 30.82 7.09 79.36
NECEvent2014_3_2_scaffold_2535 173_006_scaffold_2535
Species: Clostridium butyricum (50%)
2 1009 bp 26.66 2.38 99.60
NECEvent2014_3_2_scaffold_1734 173_006_scaffold_1734
Species: Ruminiclostridium thermocellum (50%)
2 1355 bp 29.52 11.96 80.37
NECEvent2014_3_2_scaffold_1479 173_006_scaffold_1479
Species: Oscillibacter valericigenes (50%)
2 1524 bp 35.96 12.30 84.84
NECEvent2014_3_2_scaffold_1991 173_006_scaffold_1991
Species: Clostridium ultunense (100%)
2 1212 bp 32.43 8.42 98.76
NECEvent2014_3_2_scaffold_1736 173_006_scaffold_1736
Species: Clostridiales bacterium oral taxon 876 (50%)
2 1353 bp 28.31 4.88 37.25
NECEvent2014_3_2_scaffold_770 173_006_scaffold_770
Species: Clostridium tetani (50%)
2 2333 bp 35.23 14.27 95.80
NECEvent2014_3_2_scaffold_515 173_006_scaffold_515
Species: Clostridium sp. BL8 (50%)
2 2971 bp 31.57 10.10 90.47
NECEvent2014_3_2_scaffold_1226 173_006_scaffold_1226
Species: Clostridium aceticum (100%)
2 1742 bp 32.03 6.03 91.27
NECEvent2014_3_2_scaffold_1228 173_006_scaffold_1228
Species: Clostridium ultunense (100%)
2 1741 bp 29.93 5.51 99.94
NECEvent2014_3_2_scaffold_774 173_006_scaffold_774
Species: Clostridium sp. HMP27 (50%)
2 2322 bp 31.65 9.69 88.89
NECEvent2014_3_2_scaffold_2030 173_006_scaffold_2030
Species: [Clostridium] saccharolyticum (50%)
2 1198 bp 34.31 9.64 91.90
NECEvent2014_3_2_scaffold_1229 173_006_scaffold_1229
Species: Clostridium sp. IBUN13A (50%)
2 1741 bp 28.20 6.03 91.50
NECEvent2014_3_2_scaffold_1486 173_006_scaffold_1486
Species: Caldisalinibacter kiritimatiensis (50%)
2 1520 bp 32.11 6.51 85.86
NECEvent2014_3_2_scaffold_776 173_006_scaffold_776
Species: Clostridium ultunense (100%)
2 2321 bp 29.86 6.46 89.19
NECEvent2014_3_2_scaffold_2544 173_006_scaffold_2544
Species: Caldisalinibacter kiritimatiensis (50%)
2 1008 bp 31.15 5.65 98.81
NECEvent2014_3_2_scaffold_521 173_006_scaffold_521
Species: Clostridium sulfidigenes (100%)
2 2957 bp 32.43 5.88 73.66
NECEvent2014_3_2_scaffold_1232 173_006_scaffold_1232
Species: Clostridium ultunense (50%)
2 1738 bp 32.68 6.47 99.08
NECEvent2014_3_2_scaffold_1744 173_006_scaffold_1744
Species: Peptoniphilus indolicus (50%)
2 1346 bp 33.80 10.14 98.96
NECEvent2014_3_2_scaffold_1490 173_006_scaffold_1490
Species: Clostridium ultunense (100%)
2 1517 bp 30.13 3.36 99.87
NECEvent2014_3_2_scaffold_2292 173_006_scaffold_2292
Species: Finegoldia magna (50%)
2 1096 bp 34.31 9.17 90.60
NECEvent2014_3_2_scaffold_2548 173_006_scaffold_2548
Species: Clostridium ultunense (50%)
2 1006 bp 28.53 5.37 81.11
NECEvent2014_3_2_scaffold_1747 173_006_scaffold_1747
Species: Clostridium ultunense (100%)
2 1344 bp 29.46 4.13 75.22
NECEvent2014_3_2_scaffold_2550 173_006_scaffold_2550
Species: Clostridium ultunense (100%)
2 1006 bp 30.72 3.58 89.76
NECEvent2014_3_2_scaffold_783 173_006_scaffold_783
Species: Clostridium perfringens (50%)
2 2315 bp 31.45 15.16 81.51
NECEvent2014_3_2_scaffold_2551 173_006_scaffold_2551
Species: Clostridium ultunense (50%)
2 1006 bp 27.04 1.79 96.92
NECEvent2014_3_2_scaffold_1238 173_006_scaffold_1238
Species: Clostridium ultunense (50%)
2 1726 bp 31.98 9.30 85.86
NECEvent2014_3_2_scaffold_2040 173_006_scaffold_2040
Species: Caloranaerobacter azorensis (50%)
2 1193 bp 33.36 6.54 99.58
NECEvent2014_3_2_scaffold_2296 173_006_scaffold_2296
Species: Clostridium ultunense (100%)
2 1095 bp 30.14 5.48 89.86
NECEvent2014_3_2_scaffold_1751 173_006_scaffold_1751
Species: Caloranaerobacter azorensis (50%)
2 1342 bp 32.86 6.04 70.64
NECEvent2014_3_2_scaffold_1496 173_006_scaffold_1496
Species: Clostridium ultunense (50%)
2 1511 bp 30.11 3.67 81.60
NECEvent2014_3_2_scaffold_2554 173_006_scaffold_2554
Species: Desulfitobacterium hafniense (50%)
2 1003 bp 30.51 5.68 87.34
NECEvent2014_3_2_scaffold_1241 173_006_scaffold_1241
Species: Peptoniphilus harei (50%)
2 1725 bp 32.64 9.91 84.35
NECEvent2014_3_2_scaffold_1753 173_006_scaffold_1753
Species: Clostridium ultunense (50%)
2 1341 bp 32.59 6.26 90.38
NECEvent2014_3_2_scaffold_531 173_006_scaffold_531
Species: Peptoniphilus sp. 1-1 (50%)
2 2927 bp 34.85 12.09 90.19
NECEvent2014_3_2_scaffold_2557 173_006_scaffold_2557
Species: Clostridium sp. IBUN13A (50%)
2 1003 bp 30.81 8.08 92.12
NECEvent2014_3_2_scaffold_1757 173_006_scaffold_1757
Species: Clostridium beijerinckii (50%)
2 1339 bp 26.14 5.83 100.37
NECEvent2014_3_2_scaffold_791 173_006_scaffold_791
Species: Gottschalkia acidurici (50%)
2 2299 bp 31.71 9.53 86.39
NECEvent2014_3_2_scaffold_2304 173_006_scaffold_2304
Species: Viridibacillus arenosi (50%)
2 1093 bp 32.48 5.76 82.07
NECEvent2014_3_2_scaffold_1247 173_006_scaffold_1247
Species: Desulfitobacterium metallireducens (50%)
2 1717 bp 33.26 8.39 88.06
NECEvent2014_3_2_scaffold_2305 173_006_scaffold_2305
Species: Clostridiales bacterium oral taxon 876 (50%)
2 1093 bp 31.38 3.29 92.77
NECEvent2014_3_2_scaffold_2562 173_006_scaffold_2562
Species: Clostridium ultunense (50%)
2 1001 bp 30.57 4.20 105.50
NECEvent2014_3_2_scaffold_1249 173_006_scaffold_1249
Species: Clostridium ultunense (100%)
2 1717 bp 31.80 8.91 96.97
NECEvent2014_3_2_scaffold_539 173_006_scaffold_539
Species: Clostridium tetanomorphum (50%)
2 2913 bp 33.57 15.65 81.05
NECEvent2014_3_2_scaffold_795 173_006_scaffold_795
Species: Clostridium aceticum (50%)
2 2292 bp 33.12 10.86 71.60
NECEvent2014_3_2_scaffold_1507 173_006_scaffold_1507
Species: Alkaliphilus oremlandii (50%)
2 1503 bp 30.81 7.58 89.42
NECEvent2014_3_2_scaffold_2309 173_006_scaffold_2309
Species: Caloranaerobacter azorensis (50%)
2 1092 bp 33.33 11.54 91.76
NECEvent2014_3_2_scaffold_2565 173_006_scaffold_2565
Species: [Clostridium] straminisolvens (100%)
2 1000 bp 28.90 3.90 100.20
Displaying items 651-700 of 942 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.