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NECEvent2014_3_2_Clostridium_ultunense-rel_32_9_partial

NECEvent2014_3_2_Clostridium_33_11
In projects: NECEvent2014_3_2

Consensus taxonomy: Clostridium  →  Clostridiales  →  Clostridia  →  Firmicutes  →  Bacteria

Metagenomic Context

Parent: NECEvent2014_3_2_UNK

Properties

Avg. coverage: 10.96 Longest contig: 17.14 Kbp Bin length: 2.31 Mbp GC content: 32.67 %
Contigs count: 942 Features count: 2626 rRNAs count: 0 tRNAs count: 8

Genome completeness

near complete RP 42 / 55 BSCG 45 / 51 MC: 2 ASCG 14 / 38 MC: 4

Description

Novel genotype. some may be in Unk.

Displaying items 701-750 of 942 in total
contig # features sequence size GC content (%) Cov Coding Density (%)
NECEvent2014_3_2_scaffold_1766 173_006_scaffold_1766
Species: Clostridium ultunense (100%)
2 1331 bp 30.88 5.18 98.72
NECEvent2014_3_2_scaffold_1255 173_006_scaffold_1255
Species: [Clostridium] papyrosolvens (50%)
2 1710 bp 30.47 5.79 98.25
NECEvent2014_3_2_scaffold_1767 173_006_scaffold_1767
Species: Gottschalkia acidurici (50%)
2 1331 bp 29.45 4.73 90.38
NECEvent2014_3_2_scaffold_1256 173_006_scaffold_1256
Species: Clostridium ultunense (100%)
2 1710 bp 32.75 11.58 78.25
NECEvent2014_3_2_scaffold_1257 173_006_scaffold_1257
Species: Chlamydia trachomatis (50%)
2 1710 bp 33.80 13.86 94.56
NECEvent2014_3_2_scaffold_292 173_006_scaffold_292
Species: Clostridium baratii (100%)
2 4083 bp 32.35 12.31 88.83
NECEvent2014_3_2_scaffold_293 173_006_scaffold_293
Species: Youngiibacter fragilis (50%)
2 4079 bp 34.52 15.52 86.42
NECEvent2014_3_2_scaffold_1005 173_006_scaffold_1005
Species: Clostridium ultunense (100%)
2 1982 bp 32.80 9.01 90.06
NECEvent2014_3_2_scaffold_1261 173_006_scaffold_1261
Species: Clostridium argentinense (50%)
2 1702 bp 32.02 10.93 94.12
NECEvent2014_3_2_scaffold_808 173_006_scaffold_808
Species: Clostridium ultunense (50%)
2 2278 bp 31.83 8.30 94.82
NECEvent2014_3_2_scaffold_1007 173_006_scaffold_1007
Species: Clostridium ultunense (100%)
2 1980 bp 33.79 11.06 98.33
NECEvent2014_3_2_scaffold_1520 173_006_scaffold_1520
Species: Clostridium botulinum (50%)
2 1491 bp 33.47 12.98 59.56
NECEvent2014_3_2_scaffold_810 173_006_scaffold_810
Species: Caldisalinibacter kiritimatiensis (50%)
2 2275 bp 32.26 7.19 91.65
NECEvent2014_3_2_scaffold_2066 173_006_scaffold_2066
Species: Anaerotruncus colihominis (50%)
2 1179 bp 28.24 5.09 44.53
NECEvent2014_3_2_scaffold_811 173_006_scaffold_811
Species: Clostridium ultunense (50%)
2 2273 bp 32.20 7.26 98.99
NECEvent2014_3_2_scaffold_557 173_006_scaffold_557
Species: Clostridium sp. DL-VIII (50%)
2 2867 bp 33.55 10.25 90.20
NECEvent2014_3_2_scaffold_1268 173_006_scaffold_1268
Species: Clostridium ultunense (50%)
2 1691 bp 29.80 4.44 91.90
NECEvent2014_3_2_scaffold_814 173_006_scaffold_814
Species: Clostridium ultunense (100%)
2 2268 bp 31.13 6.48 97.22
NECEvent2014_3_2_scaffold_1525 173_006_scaffold_1525
Species: Clostridium intestinale (50%)
2 1489 bp 31.83 7.25 94.49
NECEvent2014_3_2_scaffold_560 173_006_scaffold_560
Species: Alkaliphilus oremlandii (50%)
2 2855 bp 34.85 13.35 86.69
NECEvent2014_3_2_scaffold_2328 173_006_scaffold_2328
Species: Caldisalinibacter kiritimatiensis (50%)
2 1087 bp 30.17 4.28 99.91
NECEvent2014_3_2_scaffold_1272 173_006_scaffold_1272
Species: Clostridium pasteurianum (50%)
2 1686 bp 31.97 9.07 95.37
NECEvent2014_3_2_scaffold_2331 173_006_scaffold_2331
Species: [Clostridium] sticklandii (50%)
2 1087 bp 33.95 9.94 99.36
NECEvent2014_3_2_scaffold_1018 173_006_scaffold_1018
Species: Alkaliphilus oremlandii (100%)
2 1959 bp 34.00 16.08 86.06
NECEvent2014_3_2_scaffold_1786 173_006_scaffold_1786
Species: Clostridium ultunense (100%)
2 1318 bp 28.45 6.83 65.78
NECEvent2014_3_2_scaffold_1787 173_006_scaffold_1787
Species: Clostridium ultunense (50%)
2 1317 bp 28.47 5.69 58.09
NECEvent2014_3_2_scaffold_565 173_006_scaffold_565
Species: Clostridium ultunense (50%)
2 2838 bp 32.52 7.72 97.25
NECEvent2014_3_2_scaffold_2333 173_006_scaffold_2333
Species: Caloranaerobacter azorensis (50%)
2 1086 bp 32.32 5.52 100.83
NECEvent2014_3_2_scaffold_2078 173_006_scaffold_2078
Species: Clostridium ultunense (50%)
2 1176 bp 28.06 5.23 98.98
NECEvent2014_3_2_scaffold_1277 173_006_scaffold_1277
Species: Clostridium argentinense (50%)
2 1684 bp 32.24 13.36 91.75
NECEvent2014_3_2_scaffold_2079 173_006_scaffold_2079
Species: Clostridium ultunense (100%)
2 1176 bp 30.19 5.10 92.86
NECEvent2014_3_2_scaffold_1023 173_006_scaffold_1023
Species: Clostridium ultunense (100%)
2 1955 bp 31.87 10.28 90.69
NECEvent2014_3_2_scaffold_1791 173_006_scaffold_1791
Species: Youngiibacter fragilis (50%)
2 1316 bp 32.07 6.38 61.32
NECEvent2014_3_2_scaffold_825 173_006_scaffold_825
Species: Clostridium ultunense (100%)
2 2251 bp 32.03 7.20 97.42
NECEvent2014_3_2_scaffold_1537 173_006_scaffold_1537
Species: Alkaliphilus oremlandii (50%)
2 1484 bp 31.81 8.69 98.65
NECEvent2014_3_2_scaffold_2083 173_006_scaffold_2083
Species: Clostridium ultunense (100%)
2 1174 bp 30.32 7.28 97.36
NECEvent2014_3_2_scaffold_1796 173_006_scaffold_1796
Species: Clostridium tetanomorphum (50%)
2 1312 bp 30.64 5.26 98.55
NECEvent2014_3_2_scaffold_2087 173_006_scaffold_2087
Species: Clostridium ultunense (100%)
2 1173 bp 29.24 4.60 101.28
NECEvent2014_3_2_scaffold_832 173_006_scaffold_832
Species: Clostridium tyrobutyricum (50%)
2 2244 bp 30.57 6.82 89.44
NECEvent2014_3_2_scaffold_2088 173_006_scaffold_2088
Species: Roseburia hominis (100%)
2 1173 bp 31.63 5.63 99.49
NECEvent2014_3_2_scaffold_1287 173_006_scaffold_1287
Species: Alkaliphilus oremlandii (100%)
2 1677 bp 31.19 10.11 100.72
NECEvent2014_3_2_scaffold_1545 173_006_scaffold_1545
Species: Clostridiales bacterium S7-1-4 (100%)
2 1480 bp 31.49 23.72 90.81
NECEvent2014_3_2_scaffold_1547 173_006_scaffold_1547
Species: Clostridium ultunense (50%)
2 1479 bp 31.78 6.09 95.33
NECEvent2014_3_2_scaffold_2093 173_006_scaffold_2093
Species: Alkaliphilus oremlandii (100%)
2 1168 bp 28.60 2.83 93.75
NECEvent2014_3_2_scaffold_2349 173_006_scaffold_2349
Species: Peptoniphilus sp. oral taxon 386 (50%)
2 1081 bp 30.80 6.94 95.74
NECEvent2014_3_2_scaffold_1036 173_006_scaffold_1036
Species: Clostridium ultunense (100%)
2 1939 bp 33.01 11.29 90.82
NECEvent2014_3_2_scaffold_582 173_006_scaffold_582
Species: [Clostridium] clostridioforme (50%)
2 2789 bp 31.66 8.93 90.25
NECEvent2014_3_2_scaffold_2350 173_006_scaffold_2350
Species: Clostridium carboxidivorans (50%)
2 1081 bp 29.42 8.60 93.25
NECEvent2014_3_2_scaffold_1038 173_006_scaffold_1038
Species: Clostridium sp. HMP27 (50%)
2 1939 bp 32.18 6.50 99.95
NECEvent2014_3_2_scaffold_1806 173_006_scaffold_1806
Species: Desulfitobacterium dehalogenans (50%)
2 1306 bp 30.32 4.59 79.94
Displaying items 701-750 of 942 in total

Ribosomal proteins shown here were identified using keyword searches of all annotations.

The SCGs are found by conducting USEARCH with a custom database.

The SCGs are found by conducting USEARCH with a custom database.