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NECEvent2014_3_3_scaffold_279

Alias: 173_001_scaffold_279

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_279_1
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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251..955
DNA (705bp) protein (235aa)
Transcriptional regulator n=1 Tax=Citrobacter sp. KTE32 RepID=R8V334_9ENTR rbh
GntR family transcriptional regulator {ECO:0000313|EMBL:KKC61528.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="C
GntR family transcriptional regulator
NECEvent2014_3_3_scaffold_279_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

957..2384
DNA (1428bp) protein (476aa)
Multidrug or homocysteine efflux system protein n=2 Tax=Citrobacter RepID=R8V1F3_9ENTR rbh
Major facilitator transporter {ECO:0000313|EMBL:KKC61529.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobact
major facilitator transporter
NECEvent2014_3_3_scaffold_279_3
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2350..3333)
DNA (984bp) protein (328aa)
Ribose operon repressor n=2 Tax=Citrobacter RepID=R8V232_9ENTR rbh
Ribose operon repressor {ECO:0000313|EMBL:EOQ45330.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
transcriptional regulator
NECEvent2014_3_3_scaffold_279_4
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3346..4275)
DNA (930bp) protein (310aa)
Ribokinase {ECO:0000313|EMBL:KKC61531.1}; EC=2.7.1.15 {ECO:0000313|EMBL:KKC61531.1};; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citroba
ribokinase (EC:2.7.1.15)
Ribokinase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V284_9ENTR rbh
NECEvent2014_3_3_scaffold_279_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4417..5307)
DNA (891bp) protein (297aa)
D-ribose-binding periplasmic protein n=10 Tax=Enterobacteriaceae RepID=C1ME68_9ENTR rbh
D-ribose-binding periplasmic protein {ECO:0000313|EMBL:ETX61721.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacte
periplasmic binding protein/LacI transcriptional regulator
NECEvent2014_3_3_scaffold_279_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5332..6297)
DNA (966bp) protein (322aa)
Ribose ABC transporter permease protein n=10 Tax=Enterobacteriaceae RepID=D4BJ83_9ENTR rbh
rbsC; ribose ABC transporter permease
Ribose ABC transporter permease {ECO:0000313|EMBL:AHY11234.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fre
NECEvent2014_3_3_scaffold_279_7
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6303..7808)
DNA (1506bp) protein (502aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enteroba
Ribose import ATP-binding protein RbsA n=1 Tax=Citrobacter sp. KTE32 RepID=R8V1E7_9ENTR rbh
sugar ABC transporter ATP-binding protein
NECEvent2014_3_3_scaffold_279_8
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7816..8235)
DNA (420bp) protein (140aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=35703 species="Bacteria; Prote
D-ribose pyranase n=1 Tax=Citrobacter sp. KTE32 RepID=R8V226_9ENTR
D-ribose pyranase
NECEvent2014_3_3_scaffold_279_9
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8428..10296)
DNA (1869bp) protein (623aa)
Low affinity potassium transport system protein kup n=7 Tax=Citrobacter RepID=J0LU23_9ENTR rbh
Low affinity potassium transport system protein kup {ECO:0000256|HAMAP-Rule:MF_01522}; Kup system potassium uptake protein {ECO:0000256|HAMAP-Rule:MF_01522}; TaxID=35703 species="Bacteria; Proteobacte
trkD; potassium transport protein Kup
NECEvent2014_3_3_scaffold_279_10
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10627..12123
DNA (1497bp) protein (499aa)
ATPase RavA {ECO:0000256|HAMAP-Rule:MF_01625}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01625};; Regulatory ATPase variant A {ECO:0000256|HAMAP-Rule:MF_01625}; TaxID=35703 species="Bacteria; Proteobacter
ATPase RavA n=1 Tax=Citrobacter sp. KTE32 RepID=R8V6N0_9ENTR rbh
ATPase
NECEvent2014_3_3_scaffold_279_11
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12117..13568
DNA (1452bp) protein (484aa)
Protein ViaA n=1 Tax=Citrobacter sp. KTE151 RepID=R8WQC8_9ENTR rbh
Protein ViaA {ECO:0000256|HAMAP-Rule:MF_01626, ECO:0000256|SAAS:SAAS00012203}; VWA domain protein interacting with AAA ATPase {ECO:0000256|HAMAP-Rule:MF_01626}; TaxID=1169322 species="Bacteria; Proteo
hypothetical protein
NECEvent2014_3_3_scaffold_279_12
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13572..14564)
DNA (993bp) protein (331aa)
Aspartate--ammonia ligase {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088413}; EC=6.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00555, ECO:0000256|SAAS:SAAS00088403};; Asparagine synthetase A {ECO:0
asparagine synthetase AsnA (EC:6.3.1.1)
Aspartate--ammonia ligase n=2 Tax=Citrobacter RepID=R8V1E3_9ENTR rbh
NECEvent2014_3_3_scaffold_279_13
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14716..15174
DNA (459bp) protein (153aa)
Regulatory protein AsnC n=13 Tax=Enterobacteriaceae RepID=C1ME60_9ENTR
transcriptional regulator
Transcriptional regulator AsnC {ECO:0000313|EMBL:GAL45970.1}; TaxID=1114921 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
NECEvent2014_3_3_scaffold_279_14
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15263..15712
DNA (450bp) protein (150aa)
Protein mioC n=2 Tax=Citrobacter RepID=R8V277_9ENTR rbh
Protein mioC {ECO:0000313|EMBL:EOQ45319.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;
FMN-binding protein MioC
NECEvent2014_3_3_scaffold_279_15
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16085..17974
DNA (1890bp) protein (630aa)
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG n=2 Tax=Citrobacter RepID=R8V6M6_9ENTR rbh
tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG {ECO:0000256|HAMAP-Rule:MF_00129}; Glucose-inhibited division protein A {ECO:0000256|HAMAP-Rule:MF_00129}; TaxID=1169322 species="Bacte
hypothetical protein
NECEvent2014_3_3_scaffold_279_16
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18078..18701
DNA (624bp) protein (208aa)
Ribosomal RNA small subunit methyltransferase G {ECO:0000256|HAMAP-Rule:MF_00074, ECO:0000256|SAAS:SAAS00095882}; EC=2.1.1.170 {ECO:0000256|HAMAP-Rule:MF_00074};; 16S rRNA 7-methylguanosine methyltran
Ribosomal RNA small subunit methyltransferase G n=2 Tax=Citrobacter RepID=R8V322_9ENTR rbh
gidB; 16S rRNA methyltransferase
NECEvent2014_3_3_scaffold_279_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19316..19696
DNA (381bp) protein (127aa)
ATP F0F1 synthase subunit I {ECO:0000313|EMBL:KJC11923.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KJC11923.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
ATP F0F1 synthase subunit I (EC:3.6.3.14)
Atp synthase i n=8 Tax=Citrobacter RepID=J0M0B2_9ENTR
NECEvent2014_3_3_scaffold_279_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19704..20387
DNA (684bp) protein (228aa)
ATP synthase F0F1 subunit A (EC:3.6.3.14)
ATP synthase subunit a n=10 Tax=Citrobacter RepID=C1ME55_9ENTR
ATP synthase subunit a {ECO:0000256|HAMAP-Rule:MF_01393, ECO:0000256|RuleBase:RU000483}; ATP synthase F0 sector subunit a {ECO:0000256|HAMAP-Rule:MF_01393}; F-ATPase subunit 6 {ECO:0000256|HAMAP-Rule:
NECEvent2014_3_3_scaffold_279_19
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20434..20565
DNA (132bp) protein (44aa)
ATP F0F1 synthase subunit C (EC:3.6.3.14)
ATP synthase subunit C n=11 Tax=Citrobacter RepID=C1ME54_9ENTR
ATP synthase subunit c {ECO:0000256|SAAS:SAAS00242779}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter am
Displaying 19 items

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