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NECEvent2014_3_3_scaffold_170_24

Organism: NECEvent2014_3_3_Citrobacter_KTE32-rel_52_94_partial

partial RP 35 / 55 MC: 3 BSCG 32 / 51 ASCG 12 / 38 MC: 2
Location: comp(24999..25715)

Top 3 Functional Annotations

Value Algorithm Source
Sigma-E factor negative regulatory protein n=3 Tax=Citrobacter RepID=R8VCF7_9ENTR similarity UNIREF
DB: UNIREF100
  • Identity: 100.0
  • Coverage: 238.0
  • Bit_score: 475
  • Evalue 4.20e-131
  • rbh
Sigma-E factor negative regulatory protein {ECO:0000313|EMBL:EOQ48989.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" so similarity UNIPROT
DB: UniProtKB
  • Identity: 99.6
  • Coverage: 238.0
  • Bit_score: 473
  • Evalue 1.30e-130
rseA; anti-RNA polymerase sigma factor SigE similarity KEGG
DB: KEGG
  • Identity: 93.3
  • Coverage: 238.0
  • Bit_score: 444
  • Evalue 2.20e-122

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Taxonomy

Citrobacter sp. KTE151 → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 717
TTGATAATAAAGTTCAACCGCTTATCAGGCGTTGACGATAGCGGGATACTGGAAAAGGTATTAGGCATGCAGAAAGAAAAACTTTCCGCTTTAATGGATGGCGAAACGCTGGATACTGAGTTACTCAAAGAGCTGACTCAGGACCCGGAAATGCAAAAAACCTGGGAGAGTTATCACCTGATTCGCGATTCTATGCGAGGTGATACCGCCGACGTTCTCCATTTCGATATTTCCGCCCGCGTAATGGCTGCCATCCAGGATGAGCCAGTACGTCAGACGGTGCCATTGATTCCTGAGGCCCAGCCAGCACCGCACCAGTGGCAGAAAATGCCATTCTGGAAGAAAATGCGTCCATGGGCCGCGCAGCTTACCCAAATGGGTGTGGCCGCGTGTGTATCACTTGCAGTTATTGTTGGCGTCCAGCACTATAATGGGCAATCTGAAACGTCCCAGCAGCCCGAAACGCCGGTATTTAATACATTACCGATGATGGGTAAAGCCAGTCCGGTAAGCTTGGGTGTACCCTCTGACGCGACGGCCAGCGGTGGTCAGCAACAGCAGGTACAGGAGCAGCGTCGTCGTATTAATGCCATGTTGCAGGACTACGAACTGCAACGTCGACTGCACTCTGAACAGCTTCAGTTTGAGCAGGCCCAAACACAGCAAGCCGCTGTGCAGGTGCCAGGAATTCAAACTTTAGGAACGCAATCGCAGTAA
PROTEIN sequence
Length: 239
LIIKFNRLSGVDDSGILEKVLGMQKEKLSALMDGETLDTELLKELTQDPEMQKTWESYHLIRDSMRGDTADVLHFDISARVMAAIQDEPVRQTVPLIPEAQPAPHQWQKMPFWKKMRPWAAQLTQMGVAACVSLAVIVGVQHYNGQSETSQQPETPVFNTLPMMGKASPVSLGVPSDATASGGQQQQVQEQRRRINAMLQDYELQRRLHSEQLQFEQAQTQQAAVQVPGIQTLGTQSQ*