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NECEvent2014_3_3_scaffold_13

Alias: 173_001_scaffold_13

Search features with annotation key words

Displaying items 1-30 of 151 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_13_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..1749)
DNA (1749bp) protein (583aa)
Pilin isopeptide linkage domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9T7_9BIFI
Pilin isopeptide linkage domain protein {ECO:0000313|EMBL:ETO95987.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacteriu
Cna protein B-type domain protein, collagen-binding protein
NECEvent2014_3_3_scaffold_13_2
unknown

Not on your lists

1825..2043
DNA (219bp) protein (73aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_13_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1933..2919)
DNA (987bp) protein (329aa)
Sortase {ECO:0000313|EMBL:ETO95937.1}; EC=3.4.22.- {ECO:0000313|EMBL:ETO95937.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bi
Sortase n=2 Tax=Bifidobacterium dentium RepID=D2Q7Q8_BIFDB rbh
sortase
NECEvent2014_3_3_scaffold_13_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3067..4899)
DNA (1833bp) protein (611aa)
ABC1 family protein kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q7Q7_BIFDB rbh
ABC1 family protein kinase {ECO:0000313|EMBL:ADB08878.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (str
ABC transporter
NECEvent2014_3_3_scaffold_13_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4970..5206)
DNA (237bp) protein (79aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7R4_9BIFI
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26177.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_13_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5476..6234)
DNA (759bp) protein (253aa)
Cobyric acid synthase, glutamine amidotransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q7Q5_BIFDB rbh
cobyric acid synthase, glutamine amidotransferase rbh
CobB/CobQ-like glutamine amidotransferase domain protein {ECO:0000313|EMBL:ETO95996.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
NECEvent2014_3_3_scaffold_13_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6253..7827)
DNA (1575bp) protein (525aa)
murE; UDP-N-acetylmuramyl tripeptide synthetase (EC:6.3.2.29)
UDP-N-acetylmuramyl tripeptide synthetase n=2 Tax=Bifidobacterium dentium RepID=D2Q7Q4_BIFDB rbh
PF08353 domain protein {ECO:0000313|EMBL:ETO95938.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_13_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7829..9274)
DNA (1446bp) protein (482aa)
Replicative DNA helicase {ECO:0000313|EMBL:ETO95997.1}; EC=3.6.4.12 {ECO:0000313|EMBL:ETO95997.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacter
Replicative DNA helicase n=2 Tax=Bifidobacterium dentium RepID=E1NBF8_9BIFI rbh
replicative DNA helicase
NECEvent2014_3_3_scaffold_13_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9770..11596)
DNA (1827bp) protein (609aa)
glnD; protein PII uridylyltransferase (EC:2.7.7.59)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9U5_9BIFI rbh
Bifunctional uridylyltransferase/uridylyl-removing enzyme {ECO:0000256|SAAS:SAAS00228994}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" so
NECEvent2014_3_3_scaffold_13_10
Bifidobacterium reuteri, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11780..12118)
DNA (339bp) protein (113aa)
Nitrogen regulatory protein PII n=10 Tax=Bifidobacterium RepID=D2Q7Q1_BIFDB
glnB; Nitrogen regulatory protein P-II
Nitrogen regulatory protein N-II {ECO:0000313|EMBL:KFI88330.1}; TaxID=1437610 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium reute
NECEvent2014_3_3_scaffold_13_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12120..13415)
DNA (1296bp) protein (432aa)
Ammonium transporter n=2 Tax=Bifidobacterium dentium RepID=E0Q9U7_9BIFI rbh
Ammonium transporter {ECO:0000256|RuleBase:RU362002}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
amtP; ammonium ion transporter rbh
NECEvent2014_3_3_scaffold_13_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13871..15028
DNA (1158bp) protein (386aa)
Na+/H+ antiporter n=2 Tax=Bifidobacterium dentium RepID=D2Q7P9_BIFDB rbh
Na+/H+ antiporter
Transporter, CPA2 family {ECO:0000313|EMBL:ETO96028.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_13_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15136..16332)
DNA (1197bp) protein (399aa)
Signal recognition particle receptor FtsY n=2 Tax=Bifidobacterium dentium RepID=D2Q7P8_BIFDB rbh
ftsY; signal recognition particle
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; B
NECEvent2014_3_3_scaffold_13_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16615..17352
DNA (738bp) protein (246aa)
TetR-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7P7_BIFDB rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETO95930.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
TetR family transcriptional regulator
NECEvent2014_3_3_scaffold_13_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17576..18607
DNA (1032bp) protein (344aa)
Glycosyltransferase, group 2 family protein {ECO:0000313|EMBL:ETO95988.1}; EC=2.4.-.- {ECO:0000313|EMBL:ETO95988.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteria
glycosyltransferase (EC:2.4.1.212)
Glycosyltransferase n=4 Tax=Bifidobacterium dentium RepID=D2Q7P6_BIFDB rbh
NECEvent2014_3_3_scaffold_13_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18645..19124)
DNA (480bp) protein (160aa)
Truncated dipeptidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7P5_BIFDB
Peptidase, C69 domain protein {ECO:0000313|EMBL:ETO95944.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE
hypothetical protein
NECEvent2014_3_3_scaffold_13_trna_1
unknown

Not on your lists

19256..19328
DNA (73bp)
transferRNA
NECEvent2014_3_3_scaffold_13_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19850..20086
DNA (237bp) protein (79aa)
Glutaredoxin-like protein n=4 Tax=Bifidobacterium dentium RepID=D2Q7P3_BIFDB
glutaredoxin-like protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26164.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_13_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20152..21417)
DNA (1266bp) protein (422aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9V5_9BIFI rbh
PF06541 family protein {ECO:0000313|EMBL:ETO95962.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_13_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21746..22321)
DNA (576bp) protein (192aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S7T0_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO96025.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_13_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22379..23938)
DNA (1560bp) protein (520aa)
Possible adhesin n=2 Tax=Bifidobacterium dentium RepID=D2Q7P0_BIFDB rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO96022.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
adhesin
NECEvent2014_3_3_scaffold_13_21
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24255..26897
DNA (2643bp) protein (881aa)
YhgE/Pip domain protein n=2 Tax=Bifidobacterium dentium RepID=B1S7T3_9BIFI rbh
YhgE/Pip C-terminal domain protein {ECO:0000313|EMBL:ETO96004.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
phage-infection protein-like hypothetical membrane-spanning protein
NECEvent2014_3_3_scaffold_13_22
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

26894..29131
DNA (2238bp) protein (746aa)
YhgE/Pip domain protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q9V9_9BIFI rbh
ABC-2 family transporter protein {ECO:0000313|EMBL:ETO95940.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. M
phage-infection protein-like hypothetical membrane-spanning protein
NECEvent2014_3_3_scaffold_13_23
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29143..29796
DNA (654bp) protein (218aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium dentium RepID=E1NC19_9BIFI rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETO95991.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
TetR family transcriptional regulator
NECEvent2014_3_3_scaffold_13_24
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29919..30314)
DNA (396bp) protein (132aa)
Sugar mutarotase n=2 Tax=Bifidobacterium dentium RepID=D2Q7N6_BIFDB
Transporter, RbsD/FucU family {ECO:0000313|EMBL:ETO95960.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE
sugar mutarotase
NECEvent2014_3_3_scaffold_13_25
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30449..31396)
DNA (948bp) protein (316aa)
ABC-type sugar transporter, sugar-binding component n=2 Tax=Bifidobacterium dentium RepID=D2Q7N5_BIFDB rbh
sugar ABC transporter substrate-binding protein
ABC-type sugar transporter, sugar-binding component {ECO:0000313|EMBL:ADB08856.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bif
NECEvent2014_3_3_scaffold_13_26
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(31527..32516)
DNA (990bp) protein (330aa)
ABC-type sugar transporter permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q7N4_BIFDB rbh
sugar ABC transporter permease
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26155.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_13_27
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32537..34039)
DNA (1503bp) protein (501aa)
sugar ABC transporter ATPase (EC:3.6.3.17)
ABC-type sugar transporter, ATPase component {ECO:0000313|EMBL:ADB08854.1}; EC=3.6.3.17 {ECO:0000313|EMBL:ADB08854.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteri
ABC-type sugar transporter, ATPase component n=2 Tax=Bifidobacterium dentium RepID=D2Q7N3_BIFDB rbh
NECEvent2014_3_3_scaffold_13_28
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(34191..35189)
DNA (999bp) protein (333aa)
LacI-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7N2_BIFDB rbh
LacI family transcriptional regulator
LacI-type transcriptional regulator {ECO:0000313|EMBL:ADB08853.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium den
NECEvent2014_3_3_scaffold_13_29
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(35666..36730)
DNA (1065bp) protein (355aa)
Transcriptional regulator, LacI family n=2 Tax=Bifidobacterium dentium RepID=E1NC25_9BIFI rbh
Small molecule-binding regulator domain protein {ECO:0000313|EMBL:ETO95942.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
LacI family transcriptional regulator
Displaying items 1-30 of 151 in total

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