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NECEvent2014_3_3_scaffold_222

Alias: 173_001_scaffold_222

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_222_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..2913
DNA (2913bp) protein (971aa)
ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Bifidobacterium dentium RepID=D2Q5Z0_BIFDB rbh
PD-(D/E)XK nuclease family protein {ECO:0000313|EMBL:ETO95578.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
ATP-dependent DNA helicase
NECEvent2014_3_3_scaffold_222_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2910..6950
DNA (4041bp) protein (1347aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
ATP-dependent DNA helicase (EC:3.1.11.5)
ATP-dependent DNA helicase, UvrD/REP family n=2 Tax=Bifidobacterium dentium RepID=D2Q5Y9_BIFDB rbh
NECEvent2014_3_3_scaffold_222_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7108..7815
DNA (708bp) protein (236aa)
Acetyltransferase, GNAT family n=2 Tax=Bifidobacterium dentium RepID=E0Q4V5_9BIFI rbh
Acetyltransferase, GNAT family {ECO:0000313|EMBL:ETO95553.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MST
hypothetical protein
NECEvent2014_3_3_scaffold_222_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7812..9161
DNA (1350bp) protein (450aa)
MFS superfamily transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q5Y6_BIFDB rbh
MFS superfamily transporter
Transporter, major facilitator family protein {ECO:0000313|EMBL:ETO95529.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidoba
NECEvent2014_3_3_scaffold_222_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9373..10125
DNA (753bp) protein (251aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dapB; dihydrodipicolinate reductase (EC:1.3.1.26)
4-hydroxy-tetrahydrodipicolinate reductase n=2 Tax=Bifidobacterium dentium RepID=E0Q4V8_9BIFI rbh
NECEvent2014_3_3_scaffold_222_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10489..11466
DNA (978bp) protein (326aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S569_9BIFI rbh
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:ADB10349.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain
NECEvent2014_3_3_scaffold_222_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11681..11974)
DNA (294bp) protein (98aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S571_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFM42513.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27
NECEvent2014_3_3_scaffold_222_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12116..15022
DNA (2907bp) protein (969aa)
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:ETO95500.1}; EC=3.6.3.- {ECO:0000313|EMBL:ETO95500.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae
actP; copper transport P-type ATPase ActP (EC:3.6.3.12)
Copper transport P-type ATPase ActP n=2 Tax=Bifidobacterium dentium RepID=D2Q5Y2_BIFDB rbh
NECEvent2014_3_3_scaffold_222_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15058..15216)
DNA (159bp) protein (53aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S573_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:ETO95567.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_222_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15292..16548
DNA (1257bp) protein (419aa)
MFS superfamily transporter (Cyanate transporter CynX-like protein) n=2 Tax=Bifidobacterium dentium RepID=D2Q5Y0_BIFDB rbh
MFS superfamily transporter (cyanate transporter CynX-like protein)
MFS superfamily transporter (Cyanate transporter CynX-like protein) {ECO:0000313|EMBL:ADB10345.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacteriu
NECEvent2014_3_3_scaffold_222_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

16607..17659
DNA (1053bp) protein (351aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase n=3 Tax=Bifidobacterium dentium RepID=D2Q5X9_BIFDB rbh
NECEvent2014_3_3_scaffold_222_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

17780..19720
DNA (1941bp) protein (647aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q4X1_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO95593.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_222_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

19850..22459
DNA (2610bp) protein (870aa)
Membrane alanyl aminopeptidase {ECO:0000313|EMBL:ETO95600.1}; EC=3.4.11.2 {ECO:0000313|EMBL:ETO95600.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifido
pepN; PepN aminopeptidase N (EC:3.4.11.1) rbh
PepN aminopeptidase N n=2 Tax=Bifidobacterium dentium RepID=D2Q5X7_BIFDB rbh
NECEvent2014_3_3_scaffold_222_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22613..23995
DNA (1383bp) protein (461aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078319}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|SAAS:SAAS00078300};; TaxID=1161409 species="Bacter
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=2 Tax=Bifidobacterium dentium RepID=E0Q4X3_9BIFI rbh
NECEvent2014_3_3_scaffold_222_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24041..24772
DNA (732bp) protein (244aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
N-formylmethionyl-tRNA deformylase (EC:3.5.1.88)
Peptide deformylase n=2 Tax=Bifidobacterium dentium RepID=E0Q4X4_9BIFI rbh
NECEvent2014_3_3_scaffold_222_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24866..26278)
DNA (1413bp) protein (471aa)
Glutamate:g-aminobutyrate antiporter n=2 Tax=Bifidobacterium dentium RepID=D2Q5X4_BIFDB rbh
Putative glutamate/gamma-aminobutyrate antiporter {ECO:0000313|EMBL:ETO95547.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifi
glutamate:g-aminobutyrate antiporter
NECEvent2014_3_3_scaffold_222_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26640..27875)
DNA (1236bp) protein (412aa)
Glutamate decarboxylase {ECO:0000256|RuleBase:RU361171}; EC=4.1.1.15 {ECO:0000256|RuleBase:RU361171};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobac
gadB; glutamate decarboxylase (EC:4.1.1.15)
GadB glutamate decarboxylase n=4 Tax=Bifidobacterium dentium RepID=D2Q5X3_BIFDB rbh
Displaying 17 items

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