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NECEvent2014_3_3_scaffold_246

Alias: 173_001_scaffold_246

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_246_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1..225
DNA (225bp) protein (75aa)
Transcriptional regulator, AraC family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NBC5_9BIFI
AraC family transcriptional regulator
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EFM40683.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
NECEvent2014_3_3_scaffold_246_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

428..1027
DNA (600bp) protein (200aa)
TetR-type transcriptional regulator n=4 Tax=Bifidobacterium dentium RepID=D2Q7T5_BIFDB rbh
TetR family transcriptional regulator
TetR-type transcriptional regulator {ECO:0000313|EMBL:ADB08906.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium den
NECEvent2014_3_3_scaffold_246_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1066..2052
DNA (987bp) protein (329aa)
Uncharacterized protein n=3 Tax=Bifidobacterium dentium RepID=B1S7H5_9BIFI rbh
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:ETO96037.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;
NECEvent2014_3_3_scaffold_246_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2216..2806)
DNA (591bp) protein (197aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R1_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO95925.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_246_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2806..5325)
DNA (2520bp) protein (840aa)
glycosyl hydrolase family 2 (EC:3.2.1.31)
Glycoside hydrolase family 2 n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7T2_BIFDB rbh
Glycoside hydrolase, family 2, sugar binding domain protein {ECO:0000313|EMBL:ETO96051.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" so
NECEvent2014_3_3_scaffold_246_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5467..5925)
DNA (459bp) protein (153aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=E0Q9R3_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETO95974.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_246_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5937..9074)
DNA (3138bp) protein (1046aa)
beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R4_9BIFI rbh
Glycoside hydrolase, family 3, C-terminal domain protein {ECO:0000313|EMBL:ETO96005.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
NECEvent2014_3_3_scaffold_246_8
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9238..10536)
DNA (1299bp) protein (433aa)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R5_9BIFI rbh
GHKL domain protein {ECO:0000313|EMBL:ETO95933.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
two-component histidine protein kinase
NECEvent2014_3_3_scaffold_246_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10580..11296)
DNA (717bp) protein (239aa)
Two-component response regulator n=2 Tax=Bifidobacterium dentium RepID=D2Q7S8_BIFDB rbh
LytTr DNA-binding domain protein {ECO:0000313|EMBL:ETO96009.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. M
two-component response regulator
NECEvent2014_3_3_scaffold_246_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11411..12634)
DNA (1224bp) protein (408aa)
Diacylglycerol kinase catalytic domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R7_9BIFI rbh
Putative diacylglycerol kinase {ECO:0000313|EMBL:ETO95950.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MST
diacylglycerol kinase rbh
NECEvent2014_3_3_scaffold_246_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12745..13149)
DNA (405bp) protein (135aa)
TadE-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R8_9BIFI
TadE-like protein {ECO:0000313|EMBL:ETO96020.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_246_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13194..13553)
DNA (360bp) protein (120aa)
TadE-like protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9R9_9BIFI
TadE-like protein {ECO:0000313|EMBL:ETO95945.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_246_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13560..13847)
DNA (288bp) protein (96aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7P3_9BIFI
PF14029 family protein {ECO:0000313|EMBL:ETO95983.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_246_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13999..14436)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NBD8_9BIFI
type II secretion system protein, pilus assembly
Uncharacterized protein {ECO:0000313|EMBL:ETO95969.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_246_15
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14561..15310)
DNA (750bp) protein (250aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S7P6_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO96036.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein rbh
NECEvent2014_3_3_scaffold_246_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15370..16380)
DNA (1011bp) protein (337aa)
Pilus assembly protein, type II/IV secretion system n=2 Tax=Bifidobacterium dentium RepID=D2Q7S1_BIFDB rbh
Type II/IV secretion system protein {ECO:0000313|EMBL:ETO95953.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp
pilus assembly protein, type II/IV secretion system
NECEvent2014_3_3_scaffold_246_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16340..17167)
DNA (828bp) protein (276aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9S4_9BIFI rbh
CobQ/CobB/MinD/ParA nucleotide binding domain protein {ECO:0000313|EMBL:ETO96014.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="
ATPase
NECEvent2014_3_3_scaffold_246_18
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17579..18841)
DNA (1263bp) protein (421aa)
Sugar transporter n=2 Tax=Bifidobacterium dentium RepID=D2Q7R9_BIFDB rbh
sugar transporter
MFS/sugar transport protein {ECO:0000313|EMBL:ETO95947.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12
NECEvent2014_3_3_scaffold_246_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18838..21000)
DNA (2163bp) protein (721aa)
beta-glucosidase (EC:3.2.1.52)
Glycosyl hydrolase family 3 C-terminal domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7Q0_9BIFI rbh
Glycoside hydrolase, family 3, N-terminal domain protein {ECO:0000313|EMBL:ETO96029.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
NECEvent2014_3_3_scaffold_246_20
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21182..21817)
DNA (636bp) protein (212aa)
Transcriptional regulator, TetR family n=2 Tax=Bifidobacterium dentium RepID=E0Q9S7_9BIFI rbh
Transcriptional regulator, TetR family {ECO:0000313|EMBL:ETO95977.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
TetR family transcriptional regulator
NECEvent2014_3_3_scaffold_246_21
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22438..23754
DNA (1317bp) protein (439aa)
ppk; polyphosphate kinase (EC:2.7.4.1)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase n=3 Tax=Bifidobacterium dentium RepID=D2Q7R6_BIFDB rbh
Displaying 21 items

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