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NECEvent2014_3_3_scaffold_265

Alias: 173_001_scaffold_265

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_265_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2..124)
DNA (123bp) protein (41aa)
fas; fatty acid synthase Fas (EC:2.3.1.179)
Fatty acid synthase Fas n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q8A3_BIFDB
MaoC-like protein {ECO:0000313|EMBL:EFM41254.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;"
NECEvent2014_3_3_scaffold_265_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(191..1792)
DNA (1602bp) protein (534aa)
accD; accD Acetyl-/propionyl-CoA carboxylase subunit beta (EC:4.1.1.70) rbh
AccD Acetyl-/propionyl-CoA carboxylase beta chain {ECO:0000313|EMBL:ADB09038.1}; EC=4.1.1.70 {ECO:0000313|EMBL:ADB09038.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidoba
AccD Acetyl-/propionyl-CoA carboxylase beta chain n=2 Tax=Bifidobacterium dentium RepID=D2Q8A2_BIFDB rbh
NECEvent2014_3_3_scaffold_265_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1789..3651)
DNA (1863bp) protein (621aa)
accC; accC Acetyl-/propionyl-CoA carboxylase subunit alpha (EC:6.3.4.14) rbh
AccC Acetyl-/propionyl-CoA carboxylase alpha chain n=2 Tax=Bifidobacterium dentium RepID=D2Q8A1_BIFDB rbh
ATP-grasp domain protein {ECO:0000313|EMBL:ETO98348.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
NECEvent2014_3_3_scaffold_265_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3818..4399
DNA (582bp) protein (194aa)
BioY family protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8W5_9BIFI rbh
BioY family protein {ECO:0000313|EMBL:ETO98114.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
BioY-family protein
NECEvent2014_3_3_scaffold_265_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4479..5336)
DNA (858bp) protein (286aa)
Biotin-(Acetyl-CoA-carboxylase) ligase {ECO:0000313|EMBL:ETO98237.1}; EC=6.3.4.15 {ECO:0000313|EMBL:ETO98237.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae
birA; biotin--acetyl-CoA-carboxylase ligase birA (EC:2.7.1.33)
Biotin--[acetyl-CoA-carboxylase] ligase n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6X3_9BIFI rbh
NECEvent2014_3_3_scaffold_265_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5511..7493)
DNA (1983bp) protein (661aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1S6X4_9BIFI rbh
Putative membrane protein {ECO:0000313|EMBL:ETO98055.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;
hypothetical protein
NECEvent2014_3_3_scaffold_265_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7660..8439
DNA (780bp) protein (260aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S6X5_9BIFI rbh
PucR C-terminal helix-turn-helix domain protein {ECO:0000313|EMBL:ETO98047.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifido
hypothetical protein
NECEvent2014_3_3_scaffold_265_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(8570..9262)
DNA (693bp) protein (231aa)
50S ribosomal protein L1 n=4 Tax=Bifidobacterium dentium RepID=D2Q895_BIFDB rbh
rplA; 50S ribosomal protein L1P
50S ribosomal protein L1 {ECO:0000256|HAMAP-Rule:MF_01318}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (s
NECEvent2014_3_3_scaffold_265_9
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(9277..9708)
DNA (432bp) protein (144aa)
50S ribosomal protein L11 n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S6X8_9BIFI
rplK; 50S ribosomal protein L11P
50S ribosomal protein L11 {ECO:0000256|HAMAP-Rule:MF_00736, ECO:0000256|SAAS:SAAS00021680}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
NECEvent2014_3_3_scaffold_265_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10009..10821)
DNA (813bp) protein (271aa)
Transcription termination/antitermination protein NusG n=2 Tax=Bifidobacterium dentium RepID=D2Q893_BIFDB rbh
Transcription termination/antitermination protein NusG {ECO:0000256|HAMAP-Rule:MF_00948, ECO:0000256|SAAS:SAAS00078489}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacte
nusG; transcription antitermination protein nusG
NECEvent2014_3_3_scaffold_265_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10845..11072)
DNA (228bp) protein (76aa)
Protein translocase subunit SecE n=3 Tax=Bifidobacterium dentium RepID=D2Q892_BIFDB
secE; protein translocase subunit
Protein translocase subunit SecE {ECO:0000256|HAMAP-Rule:MF_00422}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium d
NECEvent2014_3_3_scaffold_265_trna_1
unknown

Not on your lists

comp(11108..11180)
DNA (73bp)
transferRNA
NECEvent2014_3_3_scaffold_265_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11412..12635)
DNA (1224bp) protein (408aa)
aspC; aspartate aminotransferase (EC:4.4.1.14)
Aminotransferase, class I/II n=2 Tax=Bifidobacterium dentium RepID=E0Q8X4_9BIFI rbh
Putative aspartate transaminase {ECO:0000313|EMBL:ETO98285.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MS
NECEvent2014_3_3_scaffold_265_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12720..13853)
DNA (1134bp) protein (378aa)
proB; glutamate 5-kinase (EC:2.7.2.11)
Glutamate 5-kinase {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00057535}; EC=2.7.2.11 {ECO:0000256|HAMAP-Rule:MF_00456, ECO:0000256|SAAS:SAAS00186442};; Gamma-glutamyl kinase {ECO:0000256|H
Glutamate 5-kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q890_BIFDB rbh
NECEvent2014_3_3_scaffold_265_14
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13961..15715)
DNA (1755bp) protein (585aa)
GTPase Obg n=4 Tax=Bifidobacterium dentium RepID=D2Q889_BIFDB rbh
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidoba
GTP-binding protein, GTP1/OBG family
NECEvent2014_3_3_scaffold_265_15
Bifidobacterium stercoris, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(15751..16002)
DNA (252bp) protein (84aa)
50S ribosomal protein L27 n=10 Tax=Bifidobacterium RepID=RL27_BIFAA
rpmA; 50S ribosomal protein L27
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=592977 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium stercoris
NECEvent2014_3_3_scaffold_265_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(16043..16351)
DNA (309bp) protein (103aa)
50S ribosomal protein L21 n=4 Tax=Bifidobacterium dentium RepID=D2Q887_BIFDB
rplU; 50S ribosomal protein L21P
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
NECEvent2014_3_3_scaffold_265_17
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16496..19249)
DNA (2754bp) protein (918aa)
Ribonuclease, Rne/Rng family n=1 Tax=Bifidobacterium dentium JCVIHMP022 RepID=E1NDQ3_9BIFI rbh
Ribonuclease E/G family protein {ECO:0000313|EMBL:ETO98231.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MS
rne; ribonuclease G
NECEvent2014_3_3_scaffold_265_18
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19587..20783)
DNA (1197bp) protein (399aa)
Succinyl-diaminopimelate desuccinylase {ECO:0000313|EMBL:EFM41274.1}; EC=3.5.1.18 {ECO:0000313|EMBL:EFM41274.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae;
dapE; succinyl-diaminopimelate desuccinylase (EC:3.5.1.16)
Succinyl-diaminopimelate desuccinylase n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8Y2_9BIFI rbh
NECEvent2014_3_3_scaffold_265_19
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20934..21878
DNA (945bp) protein (315aa)
Transporter, auxin efflux carrier (AEC) family protein n=2 Tax=Bifidobacterium dentium RepID=B1S6Z1_9BIFI rbh
Transporter, auxin efflux carrier domain protein {ECO:0000313|EMBL:ETO98369.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifid
transporter
NECEvent2014_3_3_scaffold_265_20
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21898..22119)
DNA (222bp) protein (74aa)
ATP-binding protein of ABC transporter system n=4 Tax=Bifidobacterium dentium RepID=D2Q883_BIFDB
ABC transporter ATP-binding protein
ATP-binding protein of ABC transporter system {ECO:0000313|EMBL:ADB09019.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobac
Displaying 21 items

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