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NECEvent2014_3_3_scaffold_288

Alias: 173_001_scaffold_288

Search features with annotation key words

Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_288_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(182..1975)
DNA (1794bp) protein (598aa)
ABC transporter ATP-binding protein/permease (EC:3.6.3.44)
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8H2_9BIFI rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO98017.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
NECEvent2014_3_3_scaffold_288_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1920..3737)
DNA (1818bp) protein (606aa)
ABC transporter permease (EC:3.6.3.44) rbh
ABC transporter, ATP-binding protein n=2 Tax=Bifidobacterium dentium RepID=B1S694_9BIFI rbh
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:ETO98121.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
NECEvent2014_3_3_scaffold_288_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4060..5271)
DNA (1212bp) protein (404aa)
Transporter, major facilitator family protein n=2 Tax=Bifidobacterium dentium RepID=B1S692_9BIFI rbh
Transporter, major facilitator family protein {ECO:0000313|EMBL:EFM41111.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobac
AraJ-like protein
NECEvent2014_3_3_scaffold_288_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5425..6156
DNA (732bp) protein (244aa)
two-component response regulator (EC:3.1.1.61)
LytTr DNA-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q8G8_9BIFI rbh
Response regulator receiver domain protein {ECO:0000313|EMBL:ETO98177.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacte
NECEvent2014_3_3_scaffold_288_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6149..7504
DNA (1356bp) protein (452aa)
Two-component sensor kinase n=2 Tax=Bifidobacterium dentium RepID=D2Q8P6_BIFDB rbh
GHKL domain protein {ECO:0000313|EMBL:ETO98176.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
two-component sensor kinase
NECEvent2014_3_3_scaffold_288_6
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7569..7844)
DNA (276bp) protein (92aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S689_9BIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADB09183.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium (strain
NECEvent2014_3_3_scaffold_288_7
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7871..10717)
DNA (2847bp) protein (949aa)
beta-glucosidase (EC:3.2.1.21)
Glycosyl hydrolase family 3 N-terminal domain protein n=2 Tax=Bifidobacterium dentium RepID=B1S688_9BIFI rbh
Glycoside hydrolase, family 3, N-terminal domain protein {ECO:0000313|EMBL:ETO98355.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
NECEvent2014_3_3_scaffold_288_trna_1
unknown

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comp(10932..11005)
DNA (74bp)
transferRNA
NECEvent2014_3_3_scaffold_288_8
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11041..12777
DNA (1737bp) protein (579aa)
Lysine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336}; EC=6.1.1.6 {ECO:0000256|HAMAP-Rule:MF_00252, ECO:0000256|RuleBase:RU000336};; Lysyl-tRNA synthetase {ECO:0000256|H
lysS; lysyl-tRNA synthetase (EC:6.1.1.6)
Lysine--tRNA ligase n=4 Tax=Bifidobacterium dentium RepID=D2Q8P9_BIFDB rbh
NECEvent2014_3_3_scaffold_288_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13192..13455)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Bifidobacterium dentium ATCC 27679 RepID=E0Q8G3_9BIFI
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26483.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_288_10
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13929..15014
DNA (1086bp) protein (362aa)
1,4-dihydroxy-2-naphthoate octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937}; Short=DHNA-octaprenyltransferase {ECO:0000256|HAMAP-Rule:MF_01937};; EC=2.5.1.74 {ECO:0000256|HAMAP-Rule:MF_01937};;
MenA 1,4-dihydroxy-2-naphthoate polyprenyltransferase n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q8Q0_BIFDB rbh
menA; 1,4-dihydroxy-2-naphthoate polyprenyltransferase
NECEvent2014_3_3_scaffold_288_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15171..15911
DNA (741bp) protein (247aa)
pmg2; phosphoglucomutase (EC:5.4.2.1) rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=4 Tax=Bifidobacterium dentium RepID=D2Q8Q1_BIFDB rbh
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
NECEvent2014_3_3_scaffold_288_12
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16107..17987)
DNA (1881bp) protein (627aa)
Linoleic acid isomerase n=2 Tax=Bifidobacterium dentium RepID=D2Q8Q2_BIFDB rbh
NAD(P)-binding Rossmann-like domain protein {ECO:0000313|EMBL:ETO98359.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobact
linoleic acid isomerase
NECEvent2014_3_3_scaffold_288_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18159..18839)
DNA (681bp) protein (227aa)
Phosphate-specific transport system accessory protein PhoU n=2 Tax=Bifidobacterium dentium RepID=D2Q8Q3_BIFDB rbh
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
Pho-related response regulator of two-component system
NECEvent2014_3_3_scaffold_288_14
unknown

Not on your lists

19145..19216
DNA (72bp) protein (24aa)
Pho-related sensory transduction protein kinase (EC:2.7.13.3)
Displaying 15 items

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