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NECEvent2014_3_3_scaffold_291

Alias: 173_001_scaffold_291

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_291_1
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..375)
DNA (375bp) protein (125aa)
ABC transporter, permease protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P0_9BIFI
sugar ABC transporter permease
ABC-type sugar transporter, permease component {ECO:0000313|EMBL:ADB08923.1}; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidoba
NECEvent2014_3_3_scaffold_291_2
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(403..1380)
DNA (978bp) protein (326aa)
ABC-type sugar transporter, permease component n=4 Tax=Bifidobacterium dentium RepID=D2Q7V1_BIFDB rbh
ABC transporter, permease protein {ECO:0000313|EMBL:ETO96035.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp.
sugar ABC transporter permease
NECEvent2014_3_3_scaffold_291_3
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1536..3131)
DNA (1596bp) protein (532aa)
ABC transporter, solute-binding protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P2_9BIFI rbh
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EFM40667.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium
sugar ABC transporter substrate-binding protein
NECEvent2014_3_3_scaffold_291_4
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3360..4382)
DNA (1023bp) protein (341aa)
exo-alpha-L-arabinofuranosidase (EC:3.2.1.55)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium dentium RepID=E0Q9P3_9BIFI rbh
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ETO96043.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MST
NECEvent2014_3_3_scaffold_291_5
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4563..5594)
DNA (1032bp) protein (344aa)
Sugar-binding domain protein n=2 Tax=Bifidobacterium dentium RepID=E0Q9P4_9BIFI rbh
Sugar-binding domain protein {ECO:0000313|EMBL:EFM40669.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium AT
LacI family transcriptional regulator
NECEvent2014_3_3_scaffold_291_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(5735..7849)
DNA (2115bp) protein (705aa)
beta-xylosidase (EC:3.2.1.55)
Beta-xylosidase or endo-arabinofuranosidase n=2 Tax=Bifidobacterium dentium RepID=D2Q7U7_BIFDB rbh
Glycoside hydrolase, family 43 {ECO:0000313|EMBL:ETO95984.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MST
NECEvent2014_3_3_scaffold_291_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7885..9501
DNA (1617bp) protein (539aa)
beta-xylosidase (EC:3.2.1.99)
Glycosyl hydrolase, family 43 n=2 Tax=Bifidobacterium dentium RepID=E0Q9P6_9BIFI rbh
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EFM40671.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium A
NECEvent2014_3_3_scaffold_291_8
unknown

Not on your lists

9477..9752
DNA (276bp) protein (92aa)

This feature has no annotations

NECEvent2014_3_3_scaffold_291_9
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9626..11536)
DNA (1911bp) protein (637aa)
leuA; 2-isopropylmalate synthase (EC:2.3.3.13) rbh
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
2-isopropylmalate synthase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U5_BIFDB rbh
NECEvent2014_3_3_scaffold_291_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11661..13241
DNA (1581bp) protein (527aa)
Phosphohydrolase, calcineurin-like phosphoesterase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U4_BIFDB rbh
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EFM40673.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dent
phosphohydrolase
NECEvent2014_3_3_scaffold_291_11
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13479..14099)
DNA (621bp) protein (207aa)
Uncharacterized protein n=4 Tax=Bifidobacterium dentium RepID=B1S7G3_9BIFI rbh
hypothetical protein
Bifidobacterium dentium JCM 1195 = DSM 20436 DNA, complete genome {ECO:0000313|EMBL:BAQ26215.1}; TaxID=1150423 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium
NECEvent2014_3_3_scaffold_291_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14403..15497
DNA (1095bp) protein (365aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000313|EMBL:EFM40676.1}; EC=1.2.1.11 {ECO:0000313|EMBL:EFM40676.1};; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; B
aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
Aspartate-semialdehyde dehydrogenase n=2 Tax=Bifidobacterium dentium RepID=E0Q9Q1_9BIFI rbh
NECEvent2014_3_3_scaffold_291_13
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15915..16478)
DNA (564bp) protein (188aa)
aspartokinase (EC:2.7.2.4)
Aspartokinase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U1_BIFDB rbh
ACT domain protein {ECO:0000313|EMBL:EFM40678.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium dentium ATCC 27679.;
NECEvent2014_3_3_scaffold_291_14
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16523..17284)
DNA (762bp) protein (254aa)
aspartokinase (EC:2.7.2.4)
Aspartokinase {ECO:0000256|RuleBase:RU003448}; EC=2.7.2.4 {ECO:0000256|RuleBase:RU003448};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
Aspartokinase n=4 Tax=Bifidobacterium dentium RepID=D2Q7U0_BIFDB rbh
NECEvent2014_3_3_scaffold_291_15
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17467..18069)
DNA (603bp) protein (201aa)
Recombination protein RecR n=4 Tax=Bifidobacterium dentium RepID=D2Q7T9_BIFDB rbh
recR; recombination protein RecR
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" s
NECEvent2014_3_3_scaffold_291_16
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18100..18651)
DNA (552bp) protein (184aa)
DNA polymerase III, subunit gamma and tau {ECO:0000313|EMBL:ETO95985.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ETO95985.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriace
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III, subunit gamma and tau n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1S7H0_9BIFI
NECEvent2014_3_3_scaffold_291_17
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18668..19468)
DNA (801bp) protein (267aa)
dnaX; DNA polymerase III subunits gamma and tau (EC:2.7.7.7)
DNA polymerase III subunits gamma and tau {ECO:0000313|EMBL:ADB08909.1}; EC=2.7.7.7 {ECO:0000313|EMBL:ADB08909.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriacea
DNA polymerase III subunits gamma and tau n=1 Tax=Bifidobacterium dentium (strain ATCC 27534 / DSM 20436 / JCM 1195 / Bd1) RepID=D2Q7T8_BIFDB
Displaying 17 items

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