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NECEvent2014_3_3_scaffold_292

Alias: 173_001_scaffold_292

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_3_3_scaffold_292_1
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..3105
DNA (3105bp) protein (1035aa)
Uncharacterized protein n=2 Tax=Bifidobacterium dentium RepID=B1SAH9_9BIFI rbh
Uncharacterized protein {ECO:0000313|EMBL:ETO95167.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. MSTE12.;"
hypothetical protein
NECEvent2014_3_3_scaffold_292_2
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3171..6164
DNA (2994bp) protein (998aa)
uvrA; excinuclease ABC subunit A (EC:3.6.3.28)
UvrABC system protein A n=2 Tax=Bifidobacterium dentium RepID=E0Q6E5_9BIFI rbh
UvrABC system protein A {ECO:0000256|HAMAP-Rule:MF_00205, ECO:0000256|SAAS:SAAS00088996}; Short=UvrA protein {ECO:0000256|HAMAP-Rule:MF_00205};; Excinuclease ABC subunit A {ECO:0000256|HAMAP-Rule:MF_0
NECEvent2014_3_3_scaffold_292_3
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6161..8479
DNA (2319bp) protein (773aa)
UvrABC system protein C n=2 Tax=Bifidobacterium dentium RepID=D2QAC7_BIFDB rbh
UvrABC system protein C {ECO:0000256|HAMAP-Rule:MF_00203, ECO:0000256|SAAS:SAAS00088139}; Short=Protein UvrC {ECO:0000256|HAMAP-Rule:MF_00203};; Excinuclease ABC subunit C {ECO:0000256|HAMAP-Rule:MF_0
uvrC; excinuclease ABC subunit C
NECEvent2014_3_3_scaffold_292_4
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8516..9490
DNA (975bp) protein (325aa)
Shikimate 5-dehydrogenase (EC:2.7.1.71) rbh
Shikimate dehydrogenase substrate binding domain protein n=1 Tax=Bifidobacterium dentium ATCC 27678 RepID=B1SAH6_9BIFI rbh
Shikimate dehydrogenase substrate binding domain protein {ECO:0000313|EMBL:EFM42217.1}; TaxID=871562 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source
NECEvent2014_3_3_scaffold_292_5
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9490..10428
DNA (939bp) protein (313aa)
UPF0042 nucleotide-binding protein BDP_1134 n=2 Tax=Bifidobacterium dentium RepID=D2QAC9_BIFDB rbh
Nucleotide-binding protein HMPREF1494_0734 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidob
hypothetical protein
NECEvent2014_3_3_scaffold_292_6
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10578..11528
DNA (951bp) protein (317aa)
Putative sporulation transcription regulator WhiA n=4 Tax=Bifidobacterium dentium RepID=D2QAD0_BIFDB rbh
hypothetical protein
Putative sporulation transcription regulator WhiA {ECO:0000256|HAMAP-Rule:MF_01420, ECO:0000256|SAAS:SAAS00005305}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriace
NECEvent2014_3_3_scaffold_292_7
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11659..12864
DNA (1206bp) protein (402aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=871562 species="Bacteria;
Phosphoglycerate kinase n=2 Tax=Bifidobacterium dentium RepID=E0Q6E0_9BIFI rbh
NECEvent2014_3_3_scaffold_292_8
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12987..13781
DNA (795bp) protein (265aa)
triosephosphate isomerase (EC:2.7.2.3)
Triosephosphate isomerase {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleBase:RU000517}; Short=TIM {ECO:0000256|HAMAP-Rule:MF_00147};; EC=5.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00147, ECO:0000256|RuleB
Triosephosphate isomerase n=4 Tax=Bifidobacterium dentium RepID=D2QAD4_BIFDB rbh
NECEvent2014_3_3_scaffold_292_9
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13887..14144
DNA (258bp) protein (86aa)
Uncharacterized protein n=2 Tax=Bifidobacterium RepID=R6P3F1_9BIFI
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:ETO96359.1}; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium s
secG; preprotein translocase subunit SecG
NECEvent2014_3_3_scaffold_292_10
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14235..15086
DNA (852bp) protein (284aa)
haloacid dehalogenase (EC:3.1.3.18)
Haloacid dehalogenase domain protein hydrolase, type 3 {ECO:0000313|EMBL:ADB09772.1}; EC=3.1.3.18 {ECO:0000313|EMBL:ADB09772.1};; TaxID=401473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bif
Haloacid dehalogenase domain protein hydrolase, type 3 n=2 Tax=Bifidobacterium dentium RepID=D2QAD6_BIFDB rbh
NECEvent2014_3_3_scaffold_292_11
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

15247..16788
DNA (1542bp) protein (514aa)
Aminotransferase, class I/II {ECO:0000313|EMBL:ETO96212.1}; EC=2.6.1.- {ECO:0000313|EMBL:ETO96212.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobac
aminotransferase (EC:2.6.1.5)
Aminotransferase n=2 Tax=Bifidobacterium dentium RepID=D2QAD7_BIFDB rbh
NECEvent2014_3_3_scaffold_292_12
Bifidobacterium dentium, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16845..17984)
DNA (1140bp) protein (380aa)
transaldolase (EC:2.2.1.2) rbh
Transaldolase {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00493, ECO:0000256|SAAS:SAAS00118670};; TaxID=401473 species="Bacteria; Actinobact
Transaldolase n=4 Tax=Bifidobacterium dentium RepID=D2QAD8_BIFDB rbh
NECEvent2014_3_3_scaffold_292_13
Bifidobacterium sp. MSTE12, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18075..18677)
DNA (603bp) protein (201aa)
Transketolase {ECO:0000313|EMBL:ETO96367.1}; EC=2.2.1.1 {ECO:0000313|EMBL:ETO96367.1};; TaxID=1161409 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" sourc
tkt; transketolase (EC:2.2.1.1)
Transketolase n=2 Tax=Bifidobacterium dentium RepID=E0Q6D4_9BIFI
Displaying 13 items

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